| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGAAGAAGG (2) AATGTATTAT CCTGCAGCTG (4) GCAGTGATTT (3) TAAATATTAT (2)
| 19.5 | 0.0195 |
| Cb medulloblastoma | AAGAAGAAGG (2) AATGTATTAT CCTGCAGCTG (4)
| 6.9 | 0.0069 |
| P8 GC+1d culture | AAATCGCTTC AAGAAGAAGG (2) AATGTATTAT ACTCCATTCA (2) CCTGCAGCTG (4) TAAATATTAT (2)
| 11.4 | 0.0114 |
| P8 GC+SHH+1d culture | AAATCGCTTC AAGAAGAAGG (2) AATGTATTAT CCTGCAGCTG (4) TAAATATTAT (2)
| 14 | 0.014 |
| 3T3 fibroblasts | CCTGCAGCTG (4)
| 3.5 | 0.0035 |
| E15 cortex | TAAATATTAT (2)
| 4.9 | 0.0049 |
| P1 cortex | GCTGCTTTGA TGTGCTGTGT (3)
| 9 | 0.009 |
| Hypothalamus | CCTGCAGCTG (4)
| 1.8 | 0.0018 |
| E12.5 retina | CCTGCAGCTG (4) GCTGCTTTGA TAAATATTAT (2)
| 9.4 | 0.0094 |
| E14.5 retina | AATGTATTAT GCTGCTTTGA TAAATATTAT (2)
| 16.4 | 0.0164 |
| E16.5 retina | AATGTATTAT ACTCCATTCA (2) TAAATATTAT (2) TGTGCTGTGT (3)
| 19.9 | 0.0199 |
| E18.5 retina | AATGTATTAT CCTGCAGCTG (4) TAAATATTAT (2)
| 27.2 | 0.0272 |
| P0.5 retina | AATGTATTAT CCTGCAGCTG (4) TAAATATTAT (2)
| 7.9 | 0.0079 |
| P2.5 retina | AAGAAGAAGG (2) ACTCCATTCA (2) CCTGCAGCTG (4) GCTCACTGAG (6) GCTGCTTTGA TAAATATTAT (2)
| 17.7 | 0.0177 |
| P4.5 retina | CCTGCAGCTG (4) TAAATATTAT (2)
| 19.8 | 0.0198 |
| P6.5 retina | ACTCCATTCA (2) CCTGCAGCTG (4) GCTCACTGAG (6) GCTGCTTTGA
| 10.1 | 0.0101 |
| P10.5 crx- retina | AAATCGCTTC AATGTATTAT CCTGCAGCTG (4) GCAGTGATTT (3) GCTCACTGAG (6) TGTGCTGTGT (3)
| 18.7 | 0.0187 |
| P10.5 crx+ retina | AAATCGCTTC AATGTATTAT CCTGCAGCTG (4) GCAGTGATTT (3) GCTCACTGAG (6) GCTGCTTTGA TGTGCTGTGT (3)
| 19.1 | 0.0191 |
| Adult retinal | GCAGTGATTT (3)
| 1.9 | 0.0019 |
| ONL | AAGAAGAAGG (2) AATGTATTAT CCTGCAGCTG (4) GCTCACTGAG (6) GCTGCTTTGA
| 11.4 | 0.0114 |