Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.125659	Cars	cysteinyl-tRNA synthetase	7	7 69.0 cM	27267
Gene Ontology	ATP binding | cysteine-tRNA ligase activity | cysteinyl-tRNA aminoacylation | cytoplasm | ligase activity | protein biosynthesis | soluble fraction | tRNA binding
Human Homolog	CARS[cysteinyl-tRNA synthetase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 65 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCCATTTT (3) GAAGAGATGC (3) TTTACAGCTG (3) TTTCTTTCTG (3) 14.7 0.0147 Cb medulloblastoma AAGCCATTTT (3) TTACAGCTGT TTTACAGCTG (3) TTTCTTTCTG (3) 13.8 0.0138 P8 GC+1d culture AAGCCATTTT (3) TTACAGCTGT TTTACAGCTG (3) TTTCTTTCTG (3) 21.6 0.0216 P8 GC+SHH+1d culture AAGCCATTTT (3) GAAGAGATGC (3) TTACAGCTGT TTTACAGCTG (3) TTTCTTTCTG (3) 17.6 0.0176 3T3 fibroblasts AAGCCATTTT (3) TTTACAGCTG (3) 7 0.007 E15 cortex AAGGGCTGCC TTTACAGCTG (3) 9.8 0.0098 P1 cortex GAAGAGATGC (3) 4.5 0.0045 Hypothalamus AAGCCATTTT (3) GAAGAGATGC (3) TTTACAGCTG (3) TTTCTTTCTG (3) 12.6 0.0126 E12.5 retina AAGCCATTTT (3) GAAGAGATGC (3) TTACAGCTGT TTTCTTTCTG (3) 17 0.017 E14.5 retina AAGCCATTTT (3) TTTACAGCTG (3) 14.6 0.0146 E16.5 retina AAGCCATTTT (3) GAAGAGATGC (3) TTTACAGCTG (3) 9 0.009 E18.5 retina AAGCCATTTT (3) TTTACAGCTG (3) TTTCTTTCTG (3) 9 0.009 P0.5 retina AAGCCATTTT (3) GAAGAGATGC (3) TTTACAGCTG (3) 11.8 0.0118 P2.5 retina AAGCCATTTT (3) AAGGGCTGCC TTTACAGCTG (3) TTTCTTTCTG (3) 17.6 0.0176 P4.5 retina AAGCCATTTT (3) AAGGGCTGCC TTTACAGCTG (3) TTTCTTTCTG (3) 19.8 0.0198 P6.5 retina AAGCCATTTT (3) GAAGAGATGC (3) TTTACAGCTG (3) TTTCTTTCTG (3) 13.3 0.0133 P10.5 crx- retina AAGCCATTTT (3) GAAGAGATGC (3) TTTACAGCTG (3) 11.2 0.0112 P10.5 crx+ retina AAGCCATTTT (3) AAGGGCTGCC TTTACAGCTG (3) TTTCTTTCTG (3) 13.4 0.0134 Adult retinal TTTACAGCTG (3) TTTCTTTCTG (3) 7.4 0.0074 ONL AAGCCATTTT (3) TTTACAGCTG (3) TTTCTTTCTG (3) 15.3 0.0153