Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.126193	C630040K21Rik	RIKEN cDNA C630040K21 gene	3		78708
Mm.126193	Tnik	TRAF2 and NCK interacting kinase	3		69014
Gene Ontology	ATP binding | kinase activity | protein amino acid phosphorylation | protein kinase activity | protein serine/threonine kinase activity | small GTPase regulatory/interacting protein activity | transferase activity
Human Homolog	TNIK[TRAF2 and NCK interacting kinase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCTTTTTCT (2) CTGGCTTTTC (3) TAATGTTATG (2) TCCTTCCTTC TCTAAAAAAA (2) TTTTTATTTC 29.3 0.0293 Cb medulloblastoma CTGGCTTTTC (3) TCCTTCCTTC TCTAAAAAAA (2) 20.8 0.0208 P8 GC+1d culture AGCTTTTTCT (2) CTGGCTTTTC (3) GCCGCCTACG (2) TCCTTCCTTC TCTAAAAAAA (2) TTGAAGAAAT (3) TTTTTATTTC 38.6 0.0386 P8 GC+SHH+1d culture AGCTTTTTCT (2) CTGGCTTTTC (3) GCCGCCTACG (2) TCCTTCCTTC TCTAAAAAAA (2) TTTTTATTTC 30.4 0.0304 E15 cortex AGCTTTTTCT (2) GCCGCCTACG (2) 34.6 0.0346 P1 cortex CTGGCTTTTC (3) TCTAAAAAAA (2) 13.6 0.0136 Hypothalamus TAATGTTATG (2) TCCTTCCTTC TCTAAAAAAA (2) TTTTTATTTC 27.2 0.0272 E12.5 retina AAGCAAGAAA (2) TCCTTCCTTC TCTAAAAAAA (2) TTTTTATTTC 15.1 0.0151 E14.5 retina ACAAAACCTA GGACAAATTC (2) TCCTTCCTTC TCTAAAAAAA (2) TTTTTATTTC 21.9 0.0219 E16.5 retina AAGCAAGAAA (2) TCCTTCCTTC TCTAAAAAAA (2) TTTTTATTTC 18.1 0.0181 E18.5 retina AGCTTTTTCT (2) GGACAAATTC (2) TCCTTCCTTC TCTAAAAAAA (2) TTGAAGAAAT (3) TTTTTATTTC 39.9 0.0399 P0.5 retina AGCTTTTTCT (2) GTCAAACGGG (2) TCCTTCCTTC TCTAAAAAAA (2) TTTTTATTTC 15.7 0.0157 P2.5 retina AGCTTTTTCT (2) TCCTTCCTTC TCTAAAAAAA (2) TTTTTATTTC 19.3 0.0193 P4.5 retina AGCTTTTTCT (2) GTCAAACGGG (2) TCCTTCCTTC TCTAAAAAAA (2) TTGAAGAAAT (3) TTTTTATTTC 31.8 0.0318 P6.5 retina AGCTTTTTCT (2) CTGGCTTTTC (3) TCCTTCCTTC TCTAAAAAAA (2) 16.7 0.0167 P10.5 crx- retina AAGCAAGAAA (2) AGCTTTTTCT (2) TCCTTCCTTC TCTAAAAAAA (2) TTTTTATTTC 15 0.015 P10.5 crx+ retina AGCTTTTTCT (2) TAATGTTATG (2) TCCTTCCTTC TCTAAAAAAA (2) TTGAAGAAAT (3) TTTTTATTTC 24.9 0.0249 Adult retinal AATTCAGCCC (2) GCCGCCTACG (2) TCTAAAAAAA (2) 7.5 0.0075 ONL AATTCAGCCC (2) TCTAAAAAAA (2) 5.7 0.0057