Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.126870	1500041I23Rik	RIKEN cDNA 1500041I23 gene			69001
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 148 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATCCACAGTG CGCCACCACG (4) GAAGAGATGC (3) GAATGATAAA GCAGGGCTGG (3) GCGGTTGAAG TAATAAATAA (2) TGGTTGCTGA (3) 35.9 0.0359 Cb medulloblastoma CGCCACCACG (4) GAGGGAGGGC GCAGGGCTGG (3) GCGGTTGAAG GGCCAGGGCG (2) TAATAAATAA (2) TGCCAGGAGA (2) TGGTTGCTGA (3) TTTAGTTTTA 32.2 0.0322 P8 GC+1d culture AAGCTAGCCC (3) ACTTTTTCCT ATGGAAGGAA (2) CAATCTTGAG CGCCACCACG (4) GAATGATAAA GAGGGAGGGC GCAGAAAAGC TAATAAATAA (2) TGCCAGGAGA (2) 46.6 0.0466 P8 GC+SHH+1d culture AAGCTAGCCC (3) CAATCTTGAG CGCCACCACG (4) GAAGAGATGC (3) GCAGAAAAGC GCGGTTGAAG GGCCAGGGCG (2) TAATAAATAA (2) TGGTTGCTGA (3) 57.3 0.0573 3T3 fibroblasts GGCAGAAAGA TGGTTGCTGA (3) 10.5 0.0105 E15 cortex AAAACACAGA CGCCACCACG (4) GCCAGCCTGA (3) GCGGTTGAAG GGCCAGGGCG (2) TGGTTGCTGA (3) 34.4 0.0344 P1 cortex CGCCACCACG (4) GAAGAGATGC (3) TGCTACCACA (2) TTTAGTTTTA 18 0.018 Hypothalamus AAGCTAGCCC (3) ACTTTTTCCT CGCCACCACG (4) GAAGAGATGC (3) GAATGATAAA GCAGGGCTGG (3) GCGGTTGAAG GGCAGAAAGA TAATAAATAA (2) TGGTTGCTGA (3) 72.4 0.0724 E12.5 retina AAAACACAGA ACATTCTTGT ATGGAAGGAA (2) CGCCACCACG (4) GAAAGGTCCT GAAGAGATGC (3) GCGGTTGAAG TAATAAATAA (2) TGGTTGCTGA (3) 62.1 0.0621 E14.5 retina AAAACACAGA AAGCTAGCCC (3) ACTTTTTCCT ATCCACAGTG ATGGAAGGAA (2) CGCCACCACG (4) GCCAGCCTGA (3) TAATAAATAA (2) TGCTACCACA (2) TGGTTGCTGA (3) 98.2 0.0982 E16.5 retina CGCCACCACG (4) GAAGAGATGC (3) GCGGTTGAAG TAATAAATAA (2) TGGTTGCTGA (3) 68.8 0.0688 E18.5 retina CGCCACCACG (4) GAATGATAAA GTTCTGGAGG TAATAAATAA (2) TGCTACCACA (2) TGGTTGCTGA (3) 101.8 0.1018 P0.5 retina AAGCTAGCCC (3) GAAAGGTCCT GAAGAGATGC (3) GCGGTTGAAG GGCAGAAAGA GGCCAGGGCG (2) TAATAAATAA (2) TGGTTGCTGA (3) 43.4 0.0434 P2.5 retina AAGCTAGCCC (3) CGCCACCACG (4) GAAAGGTCCT GAGGGAGGGC TAATAAATAA (2) TGCCAGGAGA (2) TGCTACCACA (2) TGGTTGCTGA (3) 91.8 0.0918 P4.5 retina ATCCACAGTG CAATCTTGAG CGCCACCACG (4) TAATAAATAA (2) TGCTACCACA (2) TGGTTGCTGA (3) TTTAGTTTTA 101.1 0.1011 P6.5 retina CGCCACCACG (4) GAAGAGATGC (3) TAATAAATAA (2) TGCTACCACA (2) TGGTTGCTGA (3) 86.7 0.0867 P10.5 crx- retina AAGCTAGCCC (3) ACATTCTTGT CGCCACCACG (4) GAAAGGTCCT GAAGAGATGC (3) GTTCTGGAGG TAATAAATAA (2) TGGTTGCTGA (3) 31.7 0.0317 P10.5 crx+ retina AAAACACAGA ACATTCTTGT ATGGAAGGAA (2) CGCCACCACG (4) GCAGAAAAGC GCGGTTGAAG TAATAAATAA (2) TGGTTGCTGA (3) 32.5 0.0325 Adult retinal ATCCACAGTG CGCCACCACG (4) GCCAGCCTGA (3) GCGGTTGAAG GGCCAGGGCG (2) GTTCTGGAGG TAATAAATAA (2) TGCCAGGAGA (2) TGGTTGCTGA (3) 43 0.043 ONL AAGCTAGCCC (3) CGCCACCACG (4) GAAAGGTCCT GCAGGGCTGG (3) GGCAGAAAGA TAATAAATAA (2) TGGTTGCTGA (3) 59.3 0.0593