| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAAAAAAAAA (2) CCAAAAAAAA (3) TGCACACACA
| 78.3 | 0.0783 |
| Cb medulloblastoma | CAAAAAAAAA (2) CCAAAAAAAA (3) TGCACACACA
| 185 | 0.185 |
| P8 GC+1d culture | AACAATCTGC CAAAAAAAAA (2) CAGCTTCCTT CCAAAAAAAA (3) GACAGATGAA TGCACACACA
| 90.1 | 0.0901 |
| P8 GC+SHH+1d culture | AACAATCTGC CAAAAAAAAA (2) CAGACTCAGG (2) CCAAAAAAAA (3) GACAGATGAA GGTGGCTGCT TGCACACACA
| 122.8 | 0.1228 |
| 3T3 fibroblasts | CAGCTTCCTT GGTGGCTGCT TGCACACACA
| 24.5 | 0.0245 |
| E15 cortex | CAAAAAAAAA (2) CAGACTCAGG (2) CAGCTTCCTT CCAAAAAAAA (3) GGTGGCTGCT
| 64.2 | 0.0642 |
| P1 cortex | CAAAAAAAAA (2) CCAAAAAAAA (3) TGCACACACA
| 68.1 | 0.0681 |
| Hypothalamus | AACAATCTGC CAAAAAAAAA (2) CCAAAAAAAA (3) TGCACACACA
| 81.4 | 0.0814 |
| E12.5 retina | CAAAAAAAAA (2) CAGCTTCCTT CCAAAAAAAA (3) GGTGGCTGCT TGCACACACA
| 48.8 | 0.0488 |
| E14.5 retina | AGCACTGGGA CAAAAAAAAA (2) CAGACTCAGG (2) CCAAAAAAAA (3) GACAGATGAA TGCACACACA
| 45.5 | 0.0455 |
| E16.5 retina | CAAAAAAAAA (2) CAGACTCAGG (2) CAGCTTCCTT CCAAAAAAAA (3) GACAGATGAA TGCACACACA
| 39.9 | 0.0399 |
| E18.5 retina | CAAAAAAAAA (2) CAGCTTCCTT CCAAAAAAAA (3) GACAGATGAA GGTGGCTGCT TGCACACACA
| 100.1 | 0.1001 |
| P0.5 retina | AACAATCTGC AGCACTGGGA CAAAAAAAAA (2) CCAAAAAAAA (3) TGCACACACA
| 176.6 | 0.1766 |
| P2.5 retina | CAAAAAAAAA (2) CAGCTTCCTT CCAAAAAAAA (3) GGTGGCTGCT TGCACACACA
| 103.9 | 0.1039 |
| P4.5 retina | CAAAAAAAAA (2) CAGACTCAGG (2) CAGCTTCCTT CCAAAAAAAA (3) GACAGATGAA GGTGGCTGCT TGCACACACA
| 95.2 | 0.0952 |
| P6.5 retina | CAAAAAAAAA (2) CAGACTCAGG (2) CCAAAAAAAA (3) GACAGATGAA TGCACACACA
| 85.1 | 0.0851 |
| P10.5 crx- retina | AACAATCTGC CAAAAAAAAA (2) CAGCTTCCTT CCAAAAAAAA (3) TGCACACACA
| 35.4 | 0.0354 |
| P10.5 crx+ retina | CAAAAAAAAA (2) CAGACTCAGG (2) CAGCTTCCTT CCAAAAAAAA (3) TGCACACACA
| 86.4 | 0.0864 |
| Adult retinal | AACAATCTGC CAAAAAAAAA (2) CAGCTTCCTT CCAAAAAAAA (3) GGTGGCTGCT TGCACACACA
| 70.6 | 0.0706 |
| ONL | CAAAAAAAAA (2) CAGACTCAGG (2) CAGCTTCCTT CCAAAAAAAA (3) TGCACACACA
| 45.9 | 0.0459 |