| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCAGGAGTGA (3) GGCCAGGGAT (3) TGCCACTTCT
| 6.5 | 0.0065 |
| Cb medulloblastoma | AATCAATAAA (6) GCAGGAGTGA (3) GGCCAGGGAT (3)
| 11.5 | 0.0115 |
| P8 GC+1d culture | GGCCAGGGAT (3)
| 2.3 | 0.0023 |
| P8 GC+SHH+1d culture | ACTCTGAACA GCAGGAGTGA (3) GGCCAGGGAT (3) TGCCACTTCT
| 10.6 | 0.0106 |
| 3T3 fibroblasts | GCAGGAGTGA (3)
| 3.5 | 0.0035 |
| E15 cortex | CTTTCTCACT
| 4.9 | 0.0049 |
| P1 cortex | CTTTCTCACT GGCCAGGGAT (3)
| 13.6 | 0.0136 |
| Hypothalamus | AATCAATAAA (6) ACTCTGAACA CTTTCTCACT GGCCAGGGAT (3) GTTTGGGGGG TGCCACTTCT
| 16.2 | 0.0162 |
| E12.5 retina | AATCAATAAA (6) GCAGGAGTGA (3) GGCCAGGGAT (3) TGCCACTTCT
| 11.4 | 0.0114 |
| E14.5 retina | CAAAGAAACA (2) GGCCAGGGAT (3) TGCCACTTCT
| 10.9 | 0.0109 |
| E16.5 retina | AATCAATAAA (6) CAAAGAAACA (2) GCAGGAGTGA (3) GGCCAGGGAT (3) TGCCACTTCT
| 16.2 | 0.0162 |
| E18.5 retina | CAAAGAAACA (2) GGCCAGGGAT (3)
| 3.6 | 0.0036 |
| P0.5 retina | GTTTGGGGGG
| 2 | 0.002 |
| P2.5 retina | AATCAATAAA (6) CAAAGAAACA (2) GCAGGAGTGA (3) GGCCAGGGAT (3)
| 14.2 | 0.0142 |
| P4.5 retina | GCAGGAGTGA (3)
| 2 | 0.002 |
| P6.5 retina | ACTCTGAACA CAAAGAAACA (2) GGCCAGGGAT (3)
| 15.1 | 0.0151 |
| P10.5 crx- retina | GCAGGAGTGA (3) GGCCAGGGAT (3) TGCCACTTCT
| 7.5 | 0.0075 |
| P10.5 crx+ retina | GCAGGAGTGA (3) GGCCAGGGAT (3)
| 3.8 | 0.0038 |
| Adult retinal | GGCCAGGGAT (3)
| 3.7 | 0.0037 |
| ONL | CTTTCTCACT GCAGGAGTGA (3) GGCCAGGGAT (3)
| 13.3 | 0.0133 |