Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.127681	Atcay	ataxia, cerebellar, Cayman type homolog (human)	10	10 43.0 cM	16467
Gene Ontology	transport
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGCTCAGGC (3) 1.6 0.0016 Cb medulloblastoma CACGCACACA GCAGCAAGGA GGGAAGGGCT TACTGATCAG 13.8 0.0138 P8 GC+1d culture AGGCTGCTGG AGGGTGCTGG GGGAAGGGCT TACTGATCAG TAGCTCAGGC (3) 11.4 0.0114 P8 GC+SHH+1d culture AGGGTGCTGG CACGCACACA GCAGCAAGGA GGGAAGGGCT TAGCTCAGGC (3) 15.2 0.0152 3T3 fibroblasts AGGCTGCTGG AGGGTGCTGG TAGCTCAGGC (3) 14 0.014 E15 cortex AGGCTGCTGG AGGGTGCTGG GGGAAGGGCT TACTGATCAG TAGCTCAGGC (3) TCTGCCCGAG 49.3 0.0493 P1 cortex AGGGTGCTGG GGGAAGGGCT TCTGCCCGAG 18.1 0.0181 Hypothalamus AGGGTGCTGG CACGCACACA GGGAAGGGCT TACTGATCAG TAGCTCAGGC (3) 27 0.027 E12.5 retina AGGGTGCTGG 3.8 0.0038 E14.5 retina GGGAAGGGCT 3.6 0.0036 E16.5 retina AGGCTGCTGG TAGCTCAGGC (3) 5.4 0.0054 E18.5 retina CACGCACACA GGAAACACAG GGAACCACAC (3) GGGAAGGGCT TAGCTCAGGC (3) 14.5 0.0145 P0.5 retina AGGGTGCTGG GGAACCACAC (3) GGGAAGGGCT TAGCTCAGGC (3) 21.6 0.0216 P2.5 retina AGGGTGCTGG GGAAACACAG GGGAAGGGCT TACTGATCAG TAGCTCAGGC (3) 17.7 0.0177 P4.5 retina GGGAAGGGCT TAGCTCAGGC (3) 17.9 0.0179 P6.5 retina AGGCTGCTGG GGGAAGGGCT TAGCTCAGGC (3) 26.7 0.0267 P10.5 crx- retina CACGCACACA GGGAAGGGCT TAGCTCAGGC (3) 16.8 0.0168 P10.5 crx+ retina GGAACCACAC (3) GGGAAGGGCT TAGCTCAGGC (3) 9.6 0.0096 Adult retinal GGAAACACAG GGGAAGGGCT TAGCTCAGGC (3) TCTGCCCGAG 48.3 0.0483 ONL TAGCTCAGGC (3) 9.6 0.0096