Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.128580	Dnmt1	DNA methyltransferase (cytosine-5) 1	9	9 5.0 cM	13433
Gene Ontology	catalytic activity | DNA (cytosine-5-)-methyltransferase activity | DNA (cytosine-5-)-methyltransferase activity | DNA binding | DNA methylation | heterochromatin | methyltransferase activity | nucleus | regulation of transcription, DNA-dependent | transferase activity | zinc ion binding
Human Homolog	DNMT1[DNA (cytosine-5-)-methyltransferase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCTGACACTA (3) 11.4 0.0114 Cb medulloblastoma CAGACTGGGG GTGCTGAAGC (2) TTGTGGGAAA 6.9 0.0069 P8 GC+1d culture CAGACTGGGG GCTGACACTA (3) 8 0.008 P8 GC+SHH+1d culture CAGACTGGGG GCTGACACTA (3) TTGTGGGAAA 9.4 0.0094 3T3 fibroblasts GCTGACACTA (3) GTGCTGAAGC (2) 14 0.014 E15 cortex CAGACTGGGG GCTGACACTA (3) 24.7 0.0247 P1 cortex CAGACTGGGG GCTGCCCCTA (3) 13.6 0.0136 Hypothalamus GCTGACACTA (3) 1.8 0.0018 E12.5 retina GCTGACACTA (3) GCTGCCCCTA (3) 11.3 0.0113 E14.5 retina GCTGACACTA (3) 5.5 0.0055 E16.5 retina AAGCCCTGGG (3) GCTGACACTA (3) GTGCTGAAGC (2) 5.4 0.0054 E18.5 retina GCTGACACTA (3) GTGCTGAAGC (2) 5.4 0.0054 P0.5 retina GCTGACACTA (3) GTGCTGAAGC (2) 7.9 0.0079 P2.5 retina CAGACTGGGG GCTGACACTA (3) GTGCTGAAGC (2) 17.6 0.0176 P4.5 retina GCTGACACTA (3) GTGCTGAAGC (2) 6 0.006 P6.5 retina AAGCCCTGGG (3) CAGACTGGGG GCTGACACTA (3) GTGCTGAAGC (2) TCCAAGCAGC (2) 11.8 0.0118 P10.5 crx- retina CAGACTGGGG GCTGACACTA (3) GCTGCCCCTA (3) GTGCTGAAGC (2) 13.1 0.0131 P10.5 crx+ retina GCTGACACTA (3) GTGCTGAAGC (2) TCCAAGCAGC (2) 5.7 0.0057 Adult retinal AAGCCCTGGG (3) CAGACTGGGG GCTGCCCCTA (3) TCCAAGCAGC (2) TTGTGGGAAA 15 0.015 ONL CAGACTGGGG 5.7 0.0057