| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCGACTCCAT
| 1.6 | 0.0016 |
| Cb medulloblastoma | GAGAAGCCTG (2) GCGACTCCAT TGGCAAATGC (6)
| 9.2 | 0.0092 |
| P8 GC+1d culture | GAGAAGCCTG (2) GCGACTCCAT
| 4.5 | 0.0045 |
| P8 GC+SHH+1d culture | GAGAAGCCTG (2) TGGCAAATGC (6)
| 3.5 | 0.0035 |
| 3T3 fibroblasts | GAGAAGCCTG (2) GCCCTTACAT GCGACTCCAT
| 14 | 0.014 |
| E15 cortex | GCGACTCCAT TGGCAAATGC (6)
| 9.8 | 0.0098 |
| P1 cortex | GCGACTCCAT GGAACGAAGC TGGCAAATGC (6)
| 13.5 | 0.0135 |
| Hypothalamus | GAGAAGCCTG (2) GCGACTCCAT
| 5.4 | 0.0054 |
| E12.5 retina | GAGAAGCCTG (2) GCGACTCCAT
| 3.8 | 0.0038 |
| E14.5 retina | GCGACTCCAT GGAACGAAGC TGGCAAATGC (6)
| 10.9 | 0.0109 |
| E16.5 retina | GAGAAGCCTG (2) GCGACTCCAT
| 5.4 | 0.0054 |
| E18.5 retina | GAGAAGCCTG (2) TGGCAAATGC (6)
| 3.6 | 0.0036 |
| P2.5 retina | GCCCTTACAT
| 1.8 | 0.0018 |
| P4.5 retina | GGAACGAAGC
| 4 | 0.004 |
| P6.5 retina | GAGAAGCCTG (2) TGGCAAATGC (6)
| 3.4 | 0.0034 |
| P10.5 crx- retina | GAGAAGCCTG (2) TGGCAAATGC (6)
| 3.8 | 0.0038 |
| P10.5 crx+ retina | GAGAAGCCTG (2) GGCTGCCCTG (2) TGGCAAATGC (6)
| 7.6 | 0.0076 |
| Adult retinal | GAGAAGCCTG (2) GCCCTTACAT GCGACTCCAT GGCTGCCCTG (2) TGGCAAATGC (6)
| 13.2 | 0.0132 |