Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.12871	Dcx	doublecortin	X		13193
Gene Ontology	central nervous system development | cytoskeleton | intracellular signaling cascade | microtubule associated complex | microtubule binding | neurogenesis | protein binding
Human Homolog	DCX[doublecortex; lissencephaly, X-linked (doublecortin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATTATATG AGAGACCACA GTGGAAGGAG TGTGTGAGGT TTTTGGCCAA (2) 21.2 0.0212 Cb medulloblastoma ACATTATTTT (3) TTTTGGCCAA (2) 6.9 0.0069 P8 GC+1d culture AAATTATATG AGAGACCACA GTCAGCAAGC (2) TGCAGTAAAT (4) TGTGTGAGGT TTATTGTACA 46.7 0.0467 P8 GC+SHH+1d culture AAATTATATG TGCAGTAAAT (4) TGTGTGAGGT TTATTGTACA 37.5 0.0375 E15 cortex AGAGACCACA GTCAGCAAGC (2) TGTGTGAGGT 49.5 0.0495 P1 cortex AGAGACCACA GTCAGCAAGC (2) GTGGAAGGAG TGTGTGAGGT 72.6 0.0726 Hypothalamus GTGGAAGGAG TGCAGTAAAT (4) TGTGTGAGGT 7.2 0.0072 E12.5 retina AAATTATATG TGTGTGAGGT 5.7 0.0057 E14.5 retina GTCAGCAAGC (2) GTGGAAGGAG TGTGTGAGGT TTTTGGCCAA (2) 10.9 0.0109 E16.5 retina AAATTATATG ACATTATTTT (3) GTGGAAGGAG TGCAGTAAAT (4) TGTGTGAGGT 18.1 0.0181 E18.5 retina AAATTATATG TGTGTGAGGT TTTTGGCCAA (2) 12.8 0.0128 P0.5 retina TGTGTGAGGT TTTTGGCCAA (2) 11.8 0.0118 P2.5 retina TGCAGTAAAT (4) TGTGTGAGGT 5.3 0.0053 P4.5 retina TGTGTGAGGT 5.9 0.0059 P6.5 retina AAATTATATG TGTGTGAGGT TTATTGTACA TTTTGGCCAA (2) 10.1 0.0101 P10.5 crx- retina AAATTATATG TGTGTGAGGT 7.5 0.0075 P10.5 crx+ retina ACATTATTTT (3) TTATTGTACA 5.7 0.0057 Adult retinal AAATTATATG ACATTATTTT (3) GTGGAAGGAG TGTGTGAGGT 7.6 0.0076 ONL AAATTATATG ACATTATTTT (3) GTGGAAGGAG TTTTGGCCAA (2) 7.6 0.0076