| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GGTCCCACTG TAAAAAAAAA (3) TGGTTGCTGG
| 117.4 | 0.1174 |
| Cb medulloblastoma | AAGAAAAGTG (2) GGTCCCACTG TAAAAAAAAA (3) TGGTTGCTGG
| 224.3 | 0.2243 |
| P8 GC+1d culture | AAGAAAAGTG (2) GGTCCCACTG TAAAAAAAAA (3) TGGTTGCTGG
| 126.7 | 0.1267 |
| P8 GC+SHH+1d culture | GGTCCCACTG TAAAAAAAAA (3) TGGTTGCTGG
| 183.9 | 0.1839 |
| 3T3 fibroblasts | TAAAAAAAAA (3) TGGTTGCTGG
| 227.8 | 0.2278 |
| E15 cortex | GGTCCCACTG TAAAAAAAAA (3) TGGTTGCTGG
| 296.9 | 0.2969 |
| P1 cortex | TAAAAAAAAA (3) TGGTTGCTGG
| 136.4 | 0.1364 |
| Hypothalamus | AAGAAAAGTG (2) GGTCCCACTG TAAAAAAAAA (3) TAGGCAAAGC TGGTTGCTGG
| 391.2 | 0.3912 |
| E12.5 retina | GGTCCCACTG TAAAAAAAAA (3) TGGTTGCTGG
| 184 | 0.184 |
| E14.5 retina | GGTCCCACTG TAAAAAAAAA (3) TGGTTGCTGG
| 980.2 | 0.9802 |
| E16.5 retina | GGTCCCACTG TAAAAAAAAA (3) TGGTTGCTGG
| 793.2 | 0.7932 |
| E18.5 retina | AAGAAAAGTG (2) TAAAAAAAAA (3) TAGGCAAAGC TGGTTGCTGG
| 367.4 | 0.3674 |
| P0.5 retina | AAGAAAAGTG (2) TAAAAAAAAA (3) TGGTTGCTGG
| 231.6 | 0.2316 |
| P2.5 retina | TAAAAAAAAA (3) TAGGCAAAGC TGGTTGCTGG
| 239.4 | 0.2394 |
| P4.5 retina | GGTCCCACTG TAAAAAAAAA (3) TGGTTGCTGG
| 277.4 | 0.2774 |
| P6.5 retina | GGTCCCACTG TAAAAAAAAA (3) TGGTTGCTGG
| 221.8 | 0.2218 |
| P10.5 crx- retina | AAGAAAAGTG (2) TAAAAAAAAA (3) TGGTTGCTGG
| 291.7 | 0.2917 |
| P10.5 crx+ retina | AAGAAAAGTG (2) GGTCCCACTG TAAAAAAAAA (3) TGGTTGCTGG
| 134.5 | 0.1345 |
| Adult retinal | TAAAAAAAAA (3) TGGTTGCTGG
| 233.3 | 0.2333 |
| ONL | GGTCCCACTG TAAAAAAAAA (3) TGGTTGCTGG
| 429 | 0.429 |