Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.129481	Nr3c1	nuclear receptor subfamily 3, group C, member 1	18	18 20.0 cM	14815
Gene Ontology	DNA binding | glucocorticoid receptor activity | ligand-dependent nuclear receptor activity | nucleus | protein binding | receptor activity | regulation of transcription, DNA-dependent | steroid binding | steroid hormone receptor activity | transcription factor activity
Human Homolog	NR3C1[nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGAATAACC TGCCATAGAA (2) TTTATGTTTT (3) 9.7 0.0097 Cb medulloblastoma CTGAATAACC TGCCATAGAA (2) 9.2 0.0092 P8 GC+1d culture ATAAAACAAT ATCCATTCCT CTGAATAACC TGCCATAGAA (2) TTTATGTTTT (3) 10.1 0.0101 P8 GC+SHH+1d culture ATAAAACAAT CTGAATAACC TGCCATAGAA (2) TTTATGTTTT (3) 17.5 0.0175 Hypothalamus TGCCATAGAA (2) 12.7 0.0127 E14.5 retina ATCCATTCCT TTTATGTTTT (3) 3.6 0.0036 E18.5 retina CTGAATAACC TGCCATAGAA (2) 3.6 0.0036 P0.5 retina ATAAAACAAT CTGAATAACC TTTATGTTTT (3) 6 0.006 P2.5 retina CTGAATAACC TGCCATAGAA (2) 5.3 0.0053 P4.5 retina CTGAATAACC 2 0.002 P6.5 retina ATCCATTCCT CTGAATAACC TGCCATAGAA (2) 6.7 0.0067 P10.5 crx- retina CTGAATAACC TGCCATAGAA (2) 3.8 0.0038 P10.5 crx+ retina ATCCATTCCT CTGAATAACC 3.8 0.0038 Adult retinal CTGAATAACC TGCCATAGAA (2) 3.8 0.0038 ONL CTGAATAACC 1.9 0.0019