| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAAAAAAAAA (2) GGTGGTTCTA TGTGTGTGTG (2)
| 76.6 | 0.0766 |
| Cb medulloblastoma | CAAAAAAAAA (2) CACAGTTAAA TGTGTGTGTG (2)
| 124.9 | 0.1249 |
| P8 GC+1d culture | CAAAAAAAAA (2) CACAGTTAAA TGTGTGTGTG (2)
| 66.2 | 0.0662 |
| P8 GC+SHH+1d culture | CAAAAAAAAA (2) CACAGTTAAA GCACAGTGGC GGTGGTTCTA TGTGTGTGTG (2)
| 92.4 | 0.0924 |
| 3T3 fibroblasts | TGTGTGTGTG (2)
| 28 | 0.028 |
| E15 cortex | CAAAAAAAAA (2)
| 34.6 | 0.0346 |
| P1 cortex | CAAAAAAAAA (2) TGTGTGTGTG (2)
| 40.9 | 0.0409 |
| Hypothalamus | CAAAAAAAAA (2) CTTGCCAGCT TGTGTGTGTG (2)
| 67 | 0.067 |
| E12.5 retina | CAAAAAAAAA (2) CTTGCCAGCT GCACAGTGGC TGTGTGTGTG (2)
| 69.5 | 0.0695 |
| E14.5 retina | CAAAAAAAAA (2) CTTGCCAGCT TGTGTGTGTG (2)
| 65.6 | 0.0656 |
| E16.5 retina | CAAAAAAAAA (2) CACAGTTAAA CTTGCCAGCT GCACAGTGGC TGTGTGTGTG (2)
| 56.1 | 0.0561 |
| E18.5 retina | CAAAAAAAAA (2) CACAGTTAAA TGTGTGTGTG (2)
| 90.9 | 0.0909 |
| P0.5 retina | CAAAAAAAAA (2) CACAGTTAAA TGTGTGTGTG (2)
| 161 | 0.161 |
| P2.5 retina | CAAAAAAAAA (2) CACAGTTAAA CTTGCCAGCT GGTGGTTCTA TGTGTGTGTG (2)
| 93.4 | 0.0934 |
| P4.5 retina | CAAAAAAAAA (2) TGTGTGTGTG (2)
| 89.2 | 0.0892 |
| P6.5 retina | CAAAAAAAAA (2) CACAGTTAAA TGTGTGTGTG (2)
| 75.1 | 0.0751 |
| P10.5 crx- retina | CAAAAAAAAA (2) CTTGCCAGCT GCACAGTGGC TGTGTGTGTG (2)
| 76.2 | 0.0762 |
| P10.5 crx+ retina | CAAAAAAAAA (2) TGTGTGTGTG (2)
| 76.9 | 0.0769 |
| Adult retinal | CAAAAAAAAA (2) CACAGTTAAA GGTGGTTCTA TGTGTGTGTG (2)
| 83.4 | 0.0834 |
| ONL | CAAAAAAAAA (2) CACAGTTAAA GCACAGTGGC TGTGTGTGTG (2)
| 44 | 0.044 |