| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CAAAAAAAAA (2) CAGATGAGGC (4) CGCTTGACGA GGAGCTGAAG (4)
| 52.1 | 0.0521 |
| Cb medulloblastoma | CAAAAAAAAA (2) CAGATGAGGC (4) GGAGCTGAAG (4) TTTGCTGTTT
| 99.4 | 0.0994 |
| P8 GC+1d culture | CAAAAAAAAA (2) GGGCTGGGCC
| 44.5 | 0.0445 |
| P8 GC+SHH+1d culture | CAAAAAAAAA (2) GGGCTGGGCC
| 64.4 | 0.0644 |
| E15 cortex | CAAAAAAAAA (2) GGGCTGGGCC
| 49.4 | 0.0494 |
| P1 cortex | CAAAAAAAAA (2) GGGCTGGGCC
| 40.9 | 0.0409 |
| Hypothalamus | CAAAAAAAAA (2) GCTGTGGGTG GGAGCTGAAG (4) GGGCTGGGCC
| 45.2 | 0.0452 |
| E12.5 retina | CAAAAAAAAA (2) GGAGGTTCCA GGGCTGGGCC
| 26.3 | 0.0263 |
| E14.5 retina | AAAAAAAACT CAAAAAAAAA (2)
| 10.9 | 0.0109 |
| E16.5 retina | CAAAAAAAAA (2) CGCTTGACGA
| 10.9 | 0.0109 |
| E18.5 retina | CAAAAAAAAA (2) CAGATGAGGC (4) GGAGCTGAAG (4) GGGCTGGGCC
| 52.7 | 0.0527 |
| P0.5 retina | CAAAAAAAAA (2) CGCTTGACGA GCTGTGGGTG GGGCTGGGCC
| 147.3 | 0.1473 |
| P2.5 retina | CAAAAAAAAA (2) GGGCTGGGCC
| 54.6 | 0.0546 |
| P4.5 retina | AAAAAAAACT CAAAAAAAAA (2) GCTGTGGGTG GGAGGTTCCA GGGCTGGGCC TTTGCTGTTT
| 53.6 | 0.0536 |
| P6.5 retina | CAAAAAAAAA (2) GGGCTGGGCC
| 33.4 | 0.0334 |
| P10.5 crx- retina | CAAAAAAAAA (2) GGAGCTGAAG (4) GGGCTGGGCC
| 18.6 | 0.0186 |
| P10.5 crx+ retina | CAAAAAAAAA (2) GGAGCTGAAG (4) GGGCTGGGCC
| 38.4 | 0.0384 |
| Adult retinal | CAAAAAAAAA (2) GGGCTGGGCC TTTGCTGTTT
| 24.2 | 0.0242 |
| ONL | CAAAAAAAAA (2) GGAGCTGAAG (4)
| 19.1 | 0.0191 |