Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.13445	Oxct1	3-oxoacid CoA transferase 1	15		67041
Gene Ontology	3-oxoacid CoA-transferase activity | CoA-transferase activity | extracellular space | metabolism | mitochondrion | mitochondrion | succinyl-CoA metabolism | transferase activity
Human Homolog	OXCT1[3-oxoacid CoA transferase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 144 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGCTAAAA AGTGCTAAGA ATATTTTTTA ATATTTTTTT (2) CCAATGCAGC GCACTCTTAG GGAAAAAAAA (2) TGTGTGCCCA (3) 40.7 0.0407 Cb medulloblastoma ATATTTTTTA CCAATGCAGC GCACTCTTAG GGAAAAAAAA (2) TCCTCTGGGA TGTGTGCCCA (3) 64.6 0.0646 P8 GC+1d culture AGTGCTAAGA ATATTTTTTA CAGCAGATTT CCAATGCAGC GAAAAATGTT GCACTCTTAG GGAAAAAAAA (2) GGAAGCAGAC TCCTCTGGGA TGCAAAGCTC (2) TGTGTGCCCA (3) TTGTGAAGGG 30.5 0.0305 P8 GC+SHH+1d culture AGTCCTGAAT AGTGCTAAGA ATATTTTTTA ATATTTTTTT (2) CAGCAGATTT CCAATGCAGC GAAAAATGTT GCACTCTTAG GGAAAAAAAA (2) TGCAAAGCTC (2) TGCAAGCTAA TGTGTGCCCA (3) 34 0.034 3T3 fibroblasts CAGCAGATTT CCAATGCAGC GCAGACACAC (2) TGCATTTGTG 28 0.028 E15 cortex CCAATGCAGC GGAAAAAAAA (2) TGCAAAGCTC (2) TGTGTGCCCA (3) 29.6 0.0296 P1 cortex ATATTTTTTA CCAATGCAGC GAAAAATGTT GGAAAAAAAA (2) 27.2 0.0272 Hypothalamus AGTGCTAAGA ATATTTTTTA GCACTCTTAG GCAGACACAC (2) GGAAAAAAAA (2) GGAAGCAGAC TCCTCTGGGA TGCAAAGCTC (2) TGTGTGCCCA (3) TTGTGAAGGG 43.3 0.0433 E12.5 retina AATGCTAAAA AGAAGACATA (3) AGTGCTAAGA CAGCAGATTT CCAATGCAGC GGAAAAAAAA (2) 15.2 0.0152 E14.5 retina ATATTTTTTA CCAATGCAGC GCACTCTTAG GGAAAAAAAA (2) GGAAGCAGAC TGCATTTGTG TGTGTGCCCA (3) TTGTGAAGGG 41.8 0.0418 E16.5 retina AGTGCTAAGA ATATTTTTTA CAGCAGATTT CCAATGCAGC GCAGACACAC (2) GGAAAAAAAA (2) GGAAGCAGAC TGCATTTGTG TGTGTGCCCA (3) 27.1 0.0271 E18.5 retina AATGCTAAAA AGTGCTAAGA ATATTTTTTA GAAAAATGTT GAAAGCAGAG (3) GGAAAAAAAA (2) 29 0.029 P0.5 retina AGAAGACATA (3) CAGCAGATTT CCAATGCAGC GCACTCTTAG GGAAAAAAAA (2) TGCAAAGCTC (2) TGTGTGCCCA (3) 31.5 0.0315 P2.5 retina AATGCTAAAA AGTGCTAAGA ATATTTTTTA CAGCAGATTT CCAATGCAGC GGAAAAAAAA (2) GGAAGCAGAC TGCAAAGCTC (2) TGCATTTGTG TGTGTGCCCA (3) 24.9 0.0249 P4.5 retina AGTCCTGAAT ATATTTTTTA CAGCAGATTT CCAATGCAGC GGAAAAAAAA (2) TGCAAGCTAA TGTGTGCCCA (3) 33.8 0.0338 P6.5 retina AATGCTAAAA AGTGCTAAGA ATATTTTTTA CCAATGCAGC GCACTCTTAG GGAAAAAAAA (2) 31.8 0.0318 P10.5 crx- retina AATGCTAAAA ATATTTTTTA CAGCAGATTT CCAATGCAGC GGAAAAAAAA (2) GGAAGCAGAC TGTGTGCCCA (3) 18.7 0.0187 P10.5 crx+ retina AGAAGACATA (3) CCAATGCAGC GAAAAATGTT GGAAAAAAAA (2) TGCAAAGCTC (2) TGTGTGCCCA (3) 28.7 0.0287 Adult retinal CAGCAGATTT CCAATGCAGC GCAGACACAC (2) GGAAAAAAAA (2) GGAAGCAGAC TCCTCTGGGA TGTGTGCCCA (3) 22.4 0.0224 ONL ATATTTTTTA GGAAAAAAAA (2) GGAAGCAGAC TCCTCTGGGA TGTGTGCCCA (3) 36.4 0.0364