| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCCCTTTTAC GGCTGAGGGA (2) TCTCTGGGTA TGTGAAGTAG (2) TGTGCTCTTT
| 24.5 | 0.0245 |
| Cb medulloblastoma | TGTGAAGTAG (2)
| 2.3 | 0.0023 |
| P8 GC+1d culture | CCCCTTTTAC GGCTGAGGGA (2) TGTGAAGTAA TGTGAAGTAG (2)
| 39.8 | 0.0398 |
| P8 GC+SHH+1d culture | CCCCTTTTAC TGTGAAGTAG (2)
| 33.9 | 0.0339 |
| 3T3 fibroblasts | CAGGAGACAG (2) CCCCTTTTAC GGCTGAGGGA (2) TGTGAAGTAG (2)
| 31.5 | 0.0315 |
| E15 cortex | GGCTGAGGGA (2) TGTGAAGTAG (2)
| 9.8 | 0.0098 |
| P1 cortex | CCCCTTTTAC TCTCTGGGTA TGTGAAGTAG (2)
| 27.2 | 0.0272 |
| Hypothalamus | CAGGAGACAG (2) TGTGAAGTAG (2)
| 14.5 | 0.0145 |
| E12.5 retina | TCTCTGGGTA TGTGAAGTAG (2)
| 22.6 | 0.0226 |
| E14.5 retina | TCTCTGGGTA TGTGAAGTAA TGTGAAGTAG (2)
| 12.7 | 0.0127 |
| E16.5 retina | ATTACGCCAA TGTGAAGTAG (2) TGTGCTCTTT
| 12.6 | 0.0126 |
| E18.5 retina | TGTGAAGTAG (2)
| 7.3 | 0.0073 |
| P0.5 retina | ATTACGCCAA GGCTGAGGGA (2) TGTGAAGTAG (2)
| 11.9 | 0.0119 |
| P2.5 retina | CCCCTTTTAC TGTGAAGTAG (2)
| 19.4 | 0.0194 |
| P4.5 retina | TGTGAAGTAG (2)
| 23.8 | 0.0238 |
| P6.5 retina | TGTGAAGTAA TGTGAAGTAG (2)
| 23.4 | 0.0234 |
| P10.5 crx- retina | TGTGAAGTAG (2)
| 33.4 | 0.0334 |
| P10.5 crx+ retina | TGTGAAGTAG (2)
| 28.8 | 0.0288 |
| Adult retinal | ATTACGCCAA TGTGAAGTAG (2)
| 29.6 | 0.0296 |
| ONL | TGTGAAGTAG (2)
| 15.3 | 0.0153 |