Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.139815
Tcf4
transcription factor 4
18
21413
Mm.139815
Tcf7l2
transcription factor 7-like 2, T-cell specific, HMG-box
19
19 53.0 cM
21416
Mm.139815
AF007007
EST AF007007
50747
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 32 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGCGATTGT
(
3
)
AGGTTTTTCT
GCAAACAAAA
6.5
0.0065
Cb medulloblastoma
AGGTTTTTCT
GCAAACAAAA
6.9
0.0069
P8 GC+SHH+1d culture
AGGTTTTTCT
CCTGCCGTTC
(
3
)
GCAAACAAAA
4.7
0.0047
3T3 fibroblasts
CCTGCCGTTC
(
3
)
TTTTGCTGTG
(
4
)
10.5
0.0105
E15 cortex
CCTGCCGTTC
(
3
)
4.9
0.0049
P1 cortex
AGGTTTTTCT
4.5
0.0045
Hypothalamus
AAGCGATTGT
(
3
)
CCTAGGTTTT
(
3
)
CCTGCCGTTC
(
3
)
TTTTGCTGTG
(
4
)
10.8
0.0108
E12.5 retina
CCTGCCGTTC
(
3
)
1.9
0.0019
E14.5 retina
AAGCGATTGT
(
3
)
CCTGCCGTTC
(
3
)
TTTTGCTGTG
(
4
)
5.4
0.0054
E16.5 retina
AAGCGATTGT
(
3
)
AGGTTTTTCT
3.6
0.0036
E18.5 retina
CCTGCCGTTC
(
3
)
1.8
0.0018
P2.5 retina
AAGCGATTGT
(
3
)
AGGTTTTTCT
CCTGCCGTTC
(
3
)
GCAAACAAAA
7.2
0.0072
P4.5 retina
GCAAACAAAA
4
0.004
P6.5 retina
CCTAGGTTTT
(
3
)
1.7
0.0017
P10.5 crx- retina
AGGTTTTTCT
1.9
0.0019
Adult retinal
AGGTTTTTCT
1.9
0.0019
ONL
CCTAGGTTTT
(
3
)
1.9
0.0019
