| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAGTTTAAAA (2) GCGTCTTGGG GCTGCTCACA (2) GGGTGCAGCC
| 19.6 | 0.0196 |
| Cb medulloblastoma | AAGTTTAAAA (2) ATCCATATTG (2) GCTGCTCACA (2) GGGTGCAGCC TACACCCTCA (2)
| 27.7 | 0.0277 |
| P8 GC+1d culture | AAGTTTAAAA (2) ACTTGTGAAG (2) ATCCATATTG (2) GCTGCTCACA (2) GGGTGCAGCC GTTACCGCTG TACACCCTCA (2)
| 34.2 | 0.0342 |
| P8 GC+SHH+1d culture | ATCCATATTG (2) GCTGCTCACA (2) GGGTGCAGCC TACACCCTCA (2)
| 19.9 | 0.0199 |
| 3T3 fibroblasts | ATCCATATTG (2) GGGTGCAGCC
| 24.5 | 0.0245 |
| E15 cortex | ATCCATATTG (2) GCTGCTCACA (2) GGGTGCAGCC GTTACCGCTG
| 64.2 | 0.0642 |
| P1 cortex | AAGTTTAAAA (2) GGGTGCAGCC
| 18.1 | 0.0181 |
| Hypothalamus | AAGTTTAAAA (2) GGGTGCAGCC
| 18.1 | 0.0181 |
| E12.5 retina | CCCACTACCA GCTGCTCACA (2) GGGTGCAGCC TCCCCCCTCA (2)
| 18.9 | 0.0189 |
| E14.5 retina | AAGTTTAAAA (2) GCTGCTCACA (2) GGGTGCAGCC TCCTGGAGAA
| 10.8 | 0.0108 |
| E16.5 retina | GCTGCTCACA (2) GGGTGCAGCC TCCCCCCTCA (2) TCCTGGAGAA
| 18.1 | 0.0181 |
| E18.5 retina | AAGTTTAAAA (2) ATCCATATTG (2) GCTGCTCACA (2) GGGTGCAGCC
| 27.3 | 0.0273 |
| P0.5 retina | ACTTGTGAAG (2) ACTTGTGAGG ATCCATATTG (2) GCTGCTCACA (2) GGGTGCAGCC GTTACCGCTG
| 37.4 | 0.0374 |
| P2.5 retina | ACTTGTGAAG (2) ATCCATATTG (2) CCCACTACCA GCTGCTCACA (2) GGGTGCAGCC
| 21.2 | 0.0212 |
| P4.5 retina | AAGTTTAAAA (2) ATCCATATTG (2) GCTGCTCACA (2) GGGTGCAGCC TCCTGGAGAA
| 25.9 | 0.0259 |
| P6.5 retina | AAGTTTAAAA (2) ACTTGTGAGG GGGTGCAGCC
| 28.3 | 0.0283 |
| P10.5 crx- retina | ATCCATATTG (2) CCCACTACCA GGGTGCAGCC TACACCCTCA (2) TCCCCCCTCA (2)
| 20.6 | 0.0206 |
| P10.5 crx+ retina | GCGTCTTGGG GCTGCTCACA (2) GGGTGCAGCC TCCCCCCTCA (2)
| 30.7 | 0.0307 |
| Adult retinal | GCGTCTTGGG GGGTGCAGCC TACACCCTCA (2)
| 20.5 | 0.0205 |
| ONL | ATCCATATTG (2) GCTGCTCACA (2) GGGTGCAGCC TCCCCCCTCA (2)
| 17.2 | 0.0172 |