| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAGGGACTTG (3) TGAGGATGAA TGCTTGCTCT (2)
| 13.1 | 0.0131 |
| Cb medulloblastoma | AGAAATTCTT TGGAAAGGCT
| 9.2 | 0.0092 |
| P8 GC+1d culture | GAAGGTGCTT TGAGGATGAA TGCTTGCTCT (2)
| 13.6 | 0.0136 |
| P8 GC+SHH+1d culture | GAAGGTGCTT GAGGGACTTG (3) TGAGGATGAA TGGAAAGGCT
| 14.1 | 0.0141 |
| P1 cortex | GAAGGTGCTT GAGGGACTTG (3)
| 9 | 0.009 |
| Hypothalamus | GAGGGACTTG (3) TGAGGATGAA TGCTTGCTCT (2)
| 10.8 | 0.0108 |
| E12.5 retina | TGAGGATGAA
| 7.5 | 0.0075 |
| E14.5 retina | GAAGGTGCTT TGAGGATGAA
| 12.7 | 0.0127 |
| E16.5 retina | TGAGGATGAA
| 5.4 | 0.0054 |
| E18.5 retina | GAAGGTGCTT TGAGGATGAA TGGAAAGGCT
| 18.2 | 0.0182 |
| P0.5 retina | TGAGGATGAA
| 3.9 | 0.0039 |
| P2.5 retina | GAGGGACTTG (3) TGAGGATGAA TGGAAAGGCT
| 10.6 | 0.0106 |
| P4.5 retina | GAGGGACTTG (3) TGAGGATGAA
| 7.9 | 0.0079 |
| P6.5 retina | GAAGGTGCTT GAGGGACTTG (3) TGAGGATGAA
| 20.1 | 0.0201 |
| P10.5 crx- retina | GAGGGACTTG (3) TGAGGATGAA TGCTTGCTCT (2)
| 9.4 | 0.0094 |
| P10.5 crx+ retina | GAGGGACTTG (3) TGAGGATGAA
| 7.6 | 0.0076 |
| ONL | TGGAAAGGCT
| 1.9 | 0.0019 |