Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.142275	Cdk5r1	cyclin-dependent kinase 5, regulatory subunit (p35) 1	11	11 B5 (11 46.5 cM)	12569
Gene Ontology	cyclin-dependent protein kinase 5 activator activity | cyclin-dependent protein kinase 5 activator activity | cyclin-dependent protein kinase 5 activator complex | cytoskeletal protein binding | kinase activity | membrane fraction | protein binding
Human Homolog	CDK5R1[cyclin-dependent kinase 5, regulatory subunit 1 (p35)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCTCAGTT ACTCATCAGA CTGCTATGAA GGGCAGTAGG TCAGATAGGT TGATGTTTTT 47.4 0.0474 Cb medulloblastoma AAGCTCAGTT CTGCTATGAA 11.5 0.0115 P8 GC+1d culture AAGCTCAGTT ACTCATCAGA CTGCTATGAA GGGCAGTAGG TCAGATAGGT TGATGTTTTT 34.2 0.0342 P8 GC+SHH+1d culture AAGCTCAGTT ACTCATCAGA CTGCTATGAA TGATGTTTTT TTAAAAAACA (2) 22.3 0.0223 3T3 fibroblasts AAGCTCAGTT 3.5 0.0035 E15 cortex AAGCTCAGTT ACTCATCAGA CTGCTATGAA TGATGTTTTT 84 0.084 P1 cortex AAGCTCAGTT ACTCATCAGA CGAACCAGGA CTGCTATGAA TCAGATAGGT TGATGTTTTT 81.8 0.0818 Hypothalamus AAGCTCAGTT ACTCATCAGA CGAACCAGGA CTGCTATGAA TCAGATAGGT TGATGTTTTT 37.9 0.0379 E12.5 retina ACTCATCAGA CTGCTATGAA 3.8 0.0038 E14.5 retina AAGCTCAGTT ACTCATCAGA CAGAACAGCT CGAACCAGGA CTGCTATGAA TTAAAAAACA (2) 45.4 0.0454 E16.5 retina AAGCTCAGTT ACTCATCAGA CGAACCAGGA CTGCTATGAA TTAAAAAACA (2) 48.8 0.0488 E18.5 retina AAGCTCAGTT ACTCATCAGA CTGCTATGAA 20 0.02 P0.5 retina AAGCTCAGTT CTGCTATGAA 17.6 0.0176 P2.5 retina AAGCTCAGTT CGAACCAGGA CTGCTATGAA 17.6 0.0176 P4.5 retina AAGCTCAGTT ACTCATCAGA CAGAACAGCT CGAACCAGGA CTGCTATGAA TCAGATAGGT TGATGTTTTT 43.6 0.0436 P6.5 retina AAGCTCAGTT ACTCATCAGA CTGCTATGAA TCAGATAGGT TGATGTTTTT 20 0.02 P10.5 crx- retina AAGCTCAGTT ACTCATCAGA CGAACCAGGA CTGCTATGAA GGGCAGTAGG TGATGTTTTT 41.1 0.0411 P10.5 crx+ retina AAGCTCAGTT CTGCTATGAA GGGCAGTAGG TGATGTTTTT TTAAAAAACA (2) 19.2 0.0192 Adult retinal AAGCTCAGTT CTGCTATGAA TGATGTTTTT 11.2 0.0112 ONL CAGAACAGCT CTGCTATGAA 5.7 0.0057