| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | TTAGGCAAGC
| 1.6 | 0.0016 |
| Cb medulloblastoma | GAGGGATGTT
| 2.3 | 0.0023 |
| P8 GC+1d culture | AATATATTTA (2) TTAGGCAAGC
| 3.4 | 0.0034 |
| P8 GC+SHH+1d culture | GAGGGATGTT GTGTAAGAAG TTAGGCAAGC TTGTTTTACA
| 5.9 | 0.0059 |
| 3T3 fibroblasts | GAGGGATGTT
| 3.5 | 0.0035 |
| E15 cortex | GAGGGATGTT
| 4.9 | 0.0049 |
| P1 cortex | AATATATTTA (2)
| 4.5 | 0.0045 |
| Hypothalamus | AATATATTTA (2) GTGTAAGAAG TTGTTTTACA
| 5.4 | 0.0054 |
| E12.5 retina | GAGGGATGTT TTGTTTTACA
| 7.6 | 0.0076 |
| E14.5 retina | AATATATTTA (2) GAGGGATGTT TTGTTTTACA
| 29.1 | 0.0291 |
| E16.5 retina | ATTACGCCAA GAGGGATGTT TTGTTTTACA
| 9 | 0.009 |
| E18.5 retina | GAGGGATGTT
| 3.6 | 0.0036 |
| P0.5 retina | ATTACGCCAA GAGGGATGTT GTGTAAGAAG
| 6 | 0.006 |
| P2.5 retina | GAGGGATGTT TTAGGCAAGC TTGTTTTACA
| 5.4 | 0.0054 |
| P4.5 retina | GAGGGATGTT GTGTAAGAAG
| 11.8 | 0.0118 |
| P6.5 retina | AATATATTTA (2) GAGGGATGTT GTGTAAGAAG
| 8.4 | 0.0084 |
| P10.5 crx- retina | AATATATTTA (2) GAGGGATGTT GTGTAAGAAG
| 7.5 | 0.0075 |
| P10.5 crx+ retina | GAGGGATGTT
| 3.8 | 0.0038 |
| Adult retinal | ATTACGCCAA GAGGGATGTT GTGTAAGAAG
| 7.5 | 0.0075 |
| ONL | AATATATTTA (2) GAGGGATGTT
| 7.6 | 0.0076 |