| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ACATTTCAAT (2) GCATCCTGTA GGGGGCCCAG (3) TCGGCCGCCC
| 11.5 | 0.0115 |
| Cb medulloblastoma | ACATTTCAAT (2) GAGGAGACGC (2) GGCCAGCTGT GGGGGCCCAG (3)
| 23.1 | 0.0231 |
| P8 GC+1d culture | AAATTTCAAT ACATTTCAAT (2) GAGGAGACGC (2) GATTCACGTT (2) GGGGGCCCAG (3)
| 33 | 0.033 |
| P8 GC+SHH+1d culture | ACATTTCAAT (2) ATGGACCTCA CACGAGGCCC GAAAAAGGGG GAAGGAGATA GAGGAGACGC (2) GGGGGCCCAG (3) TACAGGGGCA TCGGCCGCCC TCGTCCCCAT
| 27.1 | 0.0271 |
| 3T3 fibroblasts | GAGGAGACGC (2) GGGGGCCCAG (3)
| 105.1 | 0.1051 |
| E15 cortex | GAGGAGACGC (2) GGGGGCCCAG (3) GTGGGGGGGG
| 14.7 | 0.0147 |
| P1 cortex | ACATTTCAAT (2) ATGGACCTCA GGGGGCCCAG (3)
| 27.2 | 0.0272 |
| Hypothalamus | ACATTTCAAT (2) ATGGACCTCA GAGGAGACGC (2) GGCCAGCTGT GGGGGCCCAG (3) TACAGGGGCA TCGTCCCCAT TGAGAATGCA (2)
| 47 | 0.047 |
| E12.5 retina | ACATTTCAAT (2) CACGAGGCCC GGGGGCCCAG (3)
| 11.3 | 0.0113 |
| E14.5 retina | AAACTCTGGC (2) ACATTTCAAT (2) GAAGGAGATA GGCCAGCTGC (2) TCGGCCGCCC
| 16.2 | 0.0162 |
| E16.5 retina | ACATTTCAAT (2) ATGGACCTCA GGGGGCCCAG (3) TGAGAATGCA (2)
| 12.6 | 0.0126 |
| E18.5 retina | ACATTTCAAT (2) GATTCACGTT (2) GCATCCTGTA GGCCAGCTGC (2) GGGGGCCCAG (3)
| 18.1 | 0.0181 |
| P0.5 retina | ACATTTCAAT (2) GAGGAGACGC (2) GGGGGCCCAG (3)
| 25.6 | 0.0256 |
| P2.5 retina | ACATTTCAAT (2) ATGGACCTCA CACGAGGCCC GGGGGCCCAG (3)
| 21.2 | 0.0212 |
| P4.5 retina | ACATTTCAAT (2) GAAAAAGGGG GCATCCTGTA GGCCAGCTGC (2) GGGGGCCCAG (3)
| 31.8 | 0.0318 |
| P6.5 retina | AAATTTCAAT ACATTTCAAT (2) GGGGGCCCAG (3) TCGGCCGCCC
| 23.4 | 0.0234 |
| P10.5 crx- retina | ACATTTCAAT (2) ATGGACCTCA GGGGGCCCAG (3)
| 18.6 | 0.0186 |
| P10.5 crx+ retina | ACATTTCAAT (2) GAGGAGACGC (2) GCATCCTGTA GGGGGCCCAG (3) GTGGGGGGGG
| 34.6 | 0.0346 |
| Adult retinal | ACATTTCAAT (2) GGGGGCCCAG (3)
| 18.6 | 0.0186 |
| ONL | AAACTCTGGC (2) AAATTTCAAT ACATTTCAAT (2) GGGGGCCCAG (3) GTGGGGGGGG TCGTCCCCAT TGAGAATGCA (2)
| 36.3 | 0.0363 |