Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.146855	Shank3	SH3/ankyrin domain gene 3	15		58234
Gene Ontology	DNA binding | intracellular signaling cascade | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	SHANK3[SH3 and multiple ankyrin repeat domains 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 25 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAGCGCAGTG 3.3 0.0033 Cb medulloblastoma GAGCGCAGTG 4.6 0.0046 P8 GC+1d culture GAGCGCAGTG GCCCAGGGGC 12.6 0.0126 P8 GC+SHH+1d culture GAGCGCAGTG GCCCAGGGGC 11.7 0.0117 3T3 fibroblasts GAGCGCAGTG 10.5 0.0105 P1 cortex GAGCGCAGTG 9.1 0.0091 Hypothalamus GAGCGCAGTG GCCCAGGGGC 7.2 0.0072 E12.5 retina GAGCGCAGTG 15 0.015 E14.5 retina GAGCGCAGTG 9.1 0.0091 E16.5 retina GAGCGCAGTG 7.2 0.0072 E18.5 retina GAGCGCAGTG GCCCAGGGGC 7.3 0.0073 P0.5 retina GAGCGCAGTG 11.8 0.0118 P2.5 retina GAGCGCAGTG 14.1 0.0141 P4.5 retina GAGCGCAGTG GCCCAGGGGC 11.9 0.0119 P6.5 retina GAGCGCAGTG 5 0.005 P10.5 crx- retina GAGCGCAGTG GCCCAGGGGC 22.3 0.0223 P10.5 crx+ retina GAGCGCAGTG 5.8 0.0058 Adult retinal GAGCGCAGTG 5.6 0.0056 ONL GAGCGCAGTG 11.5 0.0115