Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.148039	Ggps1	geranylgeranyl diphosphate synthase 1	13	13 8.0 cM	14593
Gene Ontology	geranyltranstransferase activity | isoprenoid biosynthesis | transferase activity
Human Homolog	GGPS1[geranylgeranyl diphosphate synthase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGTAATGCCA CCATTTGGTC GCAGTTCACA TACTACTTGG TCCTATGCCC (2) TGGGTGCTGG (2) TGGTTGCTGG 89.7 0.0897 Cb medulloblastoma AGTAGCTGAG CCCATTTGGT GCAGTTCACA TACTACTTGG TGGGTGCTGG (2) TGGTTGCTGG 141 0.141 P8 GC+1d culture CCCATTTGGT GCAGTTCACA TACTACTTGG TGGGTGCTGG (2) TGGTTGCTGG 74.2 0.0742 P8 GC+SHH+1d culture AGTAATGCCA CCCATTTGGT GCAGTTCACA TACTACTTGG TATGTCTGTG (2) TGGGTGCTGG (2) TGGTTGCTGG 106.5 0.1065 3T3 fibroblasts TATGTCTGTG (2) TGGGTGCTGG (2) TGGTTGCTGG 241.8 0.2418 E15 cortex AGTAATGCCA GCAGTTCACA TGGGTGCTGG (2) TGGTTGCTGG 316.6 0.3166 P1 cortex GCAGTTCACA TATGTCTGTG (2) TGGGTGCTGG (2) TGGTTGCTGG 109 0.109 Hypothalamus AGTAGCTGAG GAGAAGACTA GCAGTTCACA TACTACTTGG TATGTCTGTG (2) TGGGTGCTGG (2) TGGTTGCTGG 376.7 0.3767 E12.5 retina AGTAATGCCA CCTGGCAAAG GAGAAGACTA GCAGTTCACA TGGGTGCTGG (2) TGGTTGCTGG 178.5 0.1785 E14.5 retina AGTAATGCCA AGTAGCTGAG CCATTTGGTC GCAGTTCACA TACTACTTGG TATGTCTGTG (2) TGGGTGCTGG (2) TGGTTGCTGG 1011.1 1.0111 E16.5 retina CCATTTGGTC GCAGTTCACA TATGTCTGTG (2) TGGGTGCTGG (2) TGGTTGCTGG 818.6 0.8186 E18.5 retina CCCATTTGGT GCAGTTCACA TGGGTGCTGG (2) TGGTTGCTGG 280.1 0.2801 P0.5 retina AGTAGCTGAG GAGAAGACTA GCAGTTCACA TACTACTTGG TGGGTGCTGG (2) TGGTTGCTGG 222 0.222 P2.5 retina CCCATTTGGT TACTACTTGG TGGGTGCTGG (2) TGGTTGCTGG 190.1 0.1901 P4.5 retina CCTGGCAAAG GAGAAGACTA GCAGTTCACA TACTACTTGG TCCTATGCCC (2) TGGGTGCTGG (2) TGGTTGCTGG 184.3 0.1843 P6.5 retina GCAGTTCACA TACTACTTGG TATGTCTGTG (2) TGGGTGCTGG (2) TGGTTGCTGG 186.7 0.1867 P10.5 crx- retina AGTAATGCCA AGTAGCTGAG CCTGGCAAAG GAGAAGACTA TACTACTTGG TCCTATGCCC (2) TGGGTGCTGG (2) TGGTTGCTGG 321.5 0.3215 P10.5 crx+ retina AGTAGCTGAG GCAGTTCACA TACTACTTGG TGGGTGCTGG (2) TGGTTGCTGG 128.7 0.1287 Adult retinal AGTAGCTGAG TACTACTTGG TGGGTGCTGG (2) TGGTTGCTGG 237.1 0.2371 ONL AGTAATGCCA GCAGTTCACA TACTACTTGG TATGTCTGTG (2) TGGGTGCTGG (2) TGGTTGCTGG 451.9 0.4519