| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) AATATCACCT (3) GCTGCAGTTG TTGTCAGGTA (3) TTTTCTCTTG
| 233.2 | 0.2332 |
| Cb medulloblastoma | AAAAAAAAAA (2) ACTTGAAAAA GCTGCAGTTG TTGTCAGGTA (3)
| 809.3 | 0.8093 |
| P8 GC+1d culture | AAAAAAAAAA (2) AATATCACCT (3) ACTTGAAAAA GCTGCAGTTG TTGTCAGGTA (3) TTTTCTCTTG
| 237.3 | 0.2373 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) AATATCACCT (3) GCTGCAGTTG TTTTCTCTTG
| 318.6 | 0.3186 |
| 3T3 fibroblasts | AAAAAAAAAA (2) AATATCACCT (3) GCTGCAGTTG TTGTCAGGTA (3)
| 115.6 | 0.1156 |
| E15 cortex | AAAAAAAAAA (2) GCTGCAGTTG
| 227.6 | 0.2276 |
| P1 cortex | AAAAAAAAAA (2) AATATCACCT (3) GCTGCAGTTG TTGTCAGGTA (3)
| 277.1 | 0.2771 |
| Hypothalamus | AAAAAAAAAA (2) AATATCACCT (3) GCTGCAGTTG TTGTCAGGTA (3)
| 193.9 | 0.1939 |
| E12.5 retina | AAAAAAAAAA (2) AATATCACCT (3) GCTGCAGTTG TTGTCAGGTA (3)
| 227.2 | 0.2272 |
| E14.5 retina | AAAAAAAAAA (2) AATATCACCT (3) GCTGCAGTTG
| 102 | 0.102 |
| E16.5 retina | AAAAAAAAAA (2) AAAACTTCAA (3) AATATCACCT (3) GCTGCAGTTG TTGTCAGGTA (3)
| 54.3 | 0.0543 |
| E18.5 retina | AAAAAAAAAA (2) AATATCACCT (3) ACTTGAAAAA GCTGCAGTTG TTGTCAGGTA (3)
| 422 | 0.422 |
| P0.5 retina | AAAAAAAAAA (2) AATATCACCT (3) ACTTGAAAAA GCTGCAGTTG
| 159.1 | 0.1591 |
| P2.5 retina | AAAAAAAAAA (2) AATATCACCT (3) GCTGCAGTTG TTGTCAGGTA (3)
| 352 | 0.352 |
| P4.5 retina | AAAAAAAAAA (2) AATATCACCT (3) GCTGCAGTTG TTGTCAGGTA (3)
| 311.1 | 0.3111 |
| P6.5 retina | AAAAAAAAAA (2) AATATCACCT (3) GCTGCAGTTG TTGTCAGGTA (3)
| 315.2 | 0.3152 |
| P10.5 crx- retina | AAAAAAAAAA (2) AATATCACCT (3) TTGTCAGGTA (3)
| 61.3 | 0.0613 |
| P10.5 crx+ retina | AAAAAAAAAA (2) AAAACTTCAA (3) AATATCACCT (3) ACTTGAAAAA GCTGCAGTTG TTGTCAGGTA (3)
| 130.6 | 0.1306 |
| Adult retinal | AAAAAAAAAA (2) AATATCACCT (3) GCTGCAGTTG TTGTCAGGTA (3)
| 77.8 | 0.0778 |
| ONL | AAAAAAAAAA (2) AATATCACCT (3) ACTTGAAAAA GCTGCAGTTG TTGTCAGGTA (3)
| 132.1 | 0.1321 |