| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CCTACCTGCA (3) CTCCTGAAGG (2) GTTCACTTTC
| 140.3 | 0.1403 |
| Cb medulloblastoma | CCTACCTGCA (3) CTCCTGAAGG (2) GTTCACTTTC
| 131.7 | 0.1317 |
| P8 GC+1d culture | AACCACATAC (2) CCTACCTGCA (3) CTCCTGAAGG (2) CTGTTGTGAA (2) GTTCACTTTC
| 82.1 | 0.0821 |
| P8 GC+SHH+1d culture | CCTACCTGCA (3) CTCCTGAAGG (2) CTGTTGTGAA (2) GTTCACTTTC
| 118.2 | 0.1182 |
| 3T3 fibroblasts | CCTACCTGCA (3) GTTCACTTTC
| 17.5 | 0.0175 |
| E15 cortex | GTTCACTTTC
| 9.9 | 0.0099 |
| P1 cortex | CCTACCTGCA (3) CTCCTGAAGG (2) GTTCACTTTC TTTATTGTGT
| 31.7 | 0.0317 |
| Hypothalamus | CCTACCTGCA (3) CTCCTGAAGG (2) GTTCACTTTC
| 92.4 | 0.0924 |
| E12.5 retina | CCTACCTGCA (3) CTCCTGAAGG (2) GTTCACTTTC
| 112.6 | 0.1126 |
| E14.5 retina | CCTACCTGCA (3) CTCCTGAAGG (2) GTTCACTTTC
| 116.6 | 0.1166 |
| E16.5 retina | AACCACATAC (2) CCTACCTGCA (3) CTCCTGAAGG (2) CTGTTGTGAA (2) GTTCACTTTC
| 108.7 | 0.1087 |
| E18.5 retina | CCTACCTGCA (3) CTCCTGAAGG (2) GTTCACTTTC TTTATTGTGT
| 231 | 0.231 |
| P0.5 retina | CCTACCTGCA (3) CTCCTGAAGG (2) GTTCACTTTC
| 88.3 | 0.0883 |
| P2.5 retina | AACCACATAC (2) CTCCTGAAGG (2) GTTCACTTTC
| 105.6 | 0.1056 |
| P4.5 retina | CCTACCTGCA (3) CTCCTGAAGG (2) GTTCACTTTC
| 128.8 | 0.1288 |
| P6.5 retina | AACCACATAC (2) CCTACCTGCA (3) CTCCTGAAGG (2) GTTCACTTTC
| 100 | 0.1 |
| P10.5 crx- retina | AACCACATAC (2) CCTACCTGCA (3) CTCCTGAAGG (2) CTGTTGTGAA (2) GTTCACTTTC
| 109.6 | 0.1096 |
| P10.5 crx+ retina | CCTACCTGCA (3) CTCCTGAAGG (2) GTTCACTTTC
| 142.3 | 0.1423 |
| Adult retinal | CCTACCTGCA (3) CTCCTGAAGG (2) CTGTTGTGAA (2) GTTCACTTTC
| 48.2 | 0.0482 |
| ONL | CTCCTGAAGG (2) GTTCACTTTC
| 36.4 | 0.0364 |