| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAATAAATGA (2) CCTTTAATCC (3)
| 53.8 | 0.0538 |
| Cb medulloblastoma | AAATAAATGA (2) CCTTTAATCC (3)
| 46.2 | 0.0462 |
| P8 GC+1d culture | AAATAAATGA (2) CCTTTAATCC (3)
| 33.1 | 0.0331 |
| P8 GC+SHH+1d culture | AAATAAATGA (2) CCAAGTTGTA (2) CCTTTAATCC (3)
| 29.3 | 0.0293 |
| 3T3 fibroblasts | CCTTTAATCC (3)
| 70.1 | 0.0701 |
| E15 cortex | CCTTTAATCC (3)
| 54.4 | 0.0544 |
| P1 cortex | AAATAAATGA (2) CCTTTAATCC (3)
| 159 | 0.159 |
| Hypothalamus | CCTTTAATCC (3) GGCCTCTTTT
| 21.7 | 0.0217 |
| E12.5 retina | AAATAAATGA (2) CCTTTAATCC (3)
| 80.7 | 0.0807 |
| E14.5 retina | AAATAAATGA (2) CCTTTAATCC (3)
| 122.1 | 0.1221 |
| E16.5 retina | AAATAAATGA (2) CCTTTAATCC (3) GGCCTCTTTT
| 74.2 | 0.0742 |
| E18.5 retina | AAATAAATGA (2) CCTTTAATCC (3)
| 27.2 | 0.0272 |
| P0.5 retina | AAATAAATGA (2) CCTTTAATCC (3)
| 74.6 | 0.0746 |
| P2.5 retina | AAATAAATGA (2) CCAAGTTGTA (2) CCTTTAATCC (3)
| 74 | 0.074 |
| P4.5 retina | CCTTTAATCC (3)
| 43.6 | 0.0436 |
| P6.5 retina | AAATAAATGA (2) CCAAGTTGTA (2) CCTTTAATCC (3)
| 75 | 0.075 |
| P10.5 crx- retina | AAATAAATGA (2) CCTTTAATCC (3)
| 65.1 | 0.0651 |
| P10.5 crx+ retina | AAATAAATGA (2) CCTTTAATCC (3)
| 40.3 | 0.0403 |
| Adult retinal | CCTTTAATCC (3)
| 129.6 | 0.1296 |
| ONL | AAATAAATGA (2) CCTTTAATCC (3)
| 86.2 | 0.0862 |