Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.149029
BB163080
expressed sequence BB163080
16
106459
Mm.149029
5830449F15Rik
RIKEN cDNA 5830449F15 gene
16
76045
Mm.149029
St6gal1
beta galactoside alpha 2,6 sialyltransferase 1
16
16 15.5 cM
20440
Mm.149029
4833423F13Rik
RIKEN cDNA 4833423F13 gene
16
73756
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 26 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTCTTTTCCC
3.3
0.0033
Cb medulloblastoma
AGTAAGGGAA (
2
)
GAGACAGAAG
(
4
)
4.6
0.0046
P8 GC+1d culture
AGTAAGGGAA (
2
)
GAAACCCAAG
(
5
)
GAGACAGAAG
(
4
)
GGGAATATGG
(
4
)
GGGGGCGGGG (
2
)
11.4
0.0114
P8 GC+SHH+1d culture
GAAACCCAAG
(
5
)
GGGAATATGG
(
4
)
GGGGGCGGGG (
2
)
4.7
0.0047
3T3 fibroblasts
GTCTTTTCCC
3.5
0.0035
E15 cortex
AGTAAGGGAA (
2
)
GGGGGCGGGG (
2
)
9.8
0.0098
Hypothalamus
GAAACCCAAG
(
5
)
GGGAATATGG
(
4
)
3.6
0.0036
E12.5 retina
GGGAATATGG
(
4
)
GGGGGCGGGG (
2
)
GTCTTTTCCC
7.6
0.0076
E16.5 retina
GTCTTTTCCC
1.8
0.0018
P0.5 retina
GGGAATATGG
(
4
)
3.9
0.0039
P2.5 retina
GAGACAGAAG
(
4
)
GGGAATATGG
(
4
)
GGGGGCGGGG (
2
)
5.4
0.0054
P10.5 crx+ retina
AGTAAGGGAA (
2
)
1.9
0.0019
ONL
GAGACAGAAG
(
4
)
1.9
0.0019
