Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.149870	Syvn1	synovial apoptosis inhibitor 1, synoviolin	19		74126
Gene Ontology	endoplasmic reticulum | integral to membrane | response to unfolded protein | ubiquitin ligase complex | ubiquitin-protein ligase activity
Human Homolog	SYVN1[synovial apoptosis inhibitor 1, synoviolin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 78 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATAACAAAAA ATCCAGGGTG GCAGCCCTGT (2) TCCAACCCAC (2) TCTTACTGGC (2) 13 0.013 Cb medulloblastoma ATAACAAAAA GTGGGCCTGG TCCAACCCAC (2) 9.2 0.0092 P8 GC+1d culture AGGGACCCTG (2) ATAACAAAAA ATCAGGGTGC TACTGCTGAG TCCAACCCAC (2) TCTTACTGGC (2) TGGCAGGCGT (2) 19.2 0.0192 P8 GC+SHH+1d culture ATAACAAAAA GCAGCCCTGT (2) GTGGGCCTGG TCCAACCCAC (2) TCTTACTGGC (2) TGGCTGGTGA 15.3 0.0153 3T3 fibroblasts ATCCAGGGTG TCCAACCCAC (2) 7 0.007 P1 cortex TCCAACCCAC (2) 4.5 0.0045 Hypothalamus AGGGACCCTG (2) ATAACAAAAA TCCAACCCAC (2) TGGCTGGTGA 9 0.009 E12.5 retina ATAACAAAAA TCCAACCCAC (2) TCTTACTGGC (2) 13.2 0.0132 E14.5 retina ATAACAAAAA ATCAGGGTGC TCCAACCCAC (2) TGGCTGGTGA 14.5 0.0145 E16.5 retina ATAACAAAAA ATCAGGGTGC TACTGCTGAG TCCAACCCAC (2) TGGCAGGCGT (2) TGGCTGGTGA 25.3 0.0253 E18.5 retina ATAACAAAAA GTGGGCCTGG TCCAACCCAC (2) TGGCTGGTGA 16.4 0.0164 P0.5 retina AGGGACCCTG (2) ATAACAAAAA GTGGGCCTGG TCCAACCCAC (2) 9.9 0.0099 P2.5 retina ATAACAAAAA ATCCAGGGTG TCCAACCCAC (2) TCTTACTGGC (2) TGGCAGGCGT (2) 12.4 0.0124 P4.5 retina ATAACAAAAA TACTGCTGAG TCCAACCCAC (2) TGGCTGGTGA 17.8 0.0178 P6.5 retina AGGGACCCTG (2) ATAACAAAAA ATCCAGGGTG TACTGCTGAG TCCAACCCAC (2) TGGCTGGTGA 21.8 0.0218 P10.5 crx- retina GCAGCCCTGT (2) GTGGGCCTGG TCCAACCCAC (2) TCTTACTGGC (2) TGGCAGGCGT (2) 16.8 0.0168 P10.5 crx+ retina GTGGGCCTGG TCCAACCCAC (2) TCTTACTGGC (2) 17.3 0.0173 Adult retinal TCCAACCCAC (2) TCTTACTGGC (2) TGGCAGGCGT (2) 11.2 0.0112 ONL GTGGGCCTGG TCCAACCCAC (2) TCTTACTGGC (2) 21 0.021