Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.150540
Ppp1r16b
protein phosphatase 1, regulatory (inhibitor) subunit 16B
2
228852
Mm.150540
C130078N17Rik
RIKEN cDNA C130078N17 gene
2
228853
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACTCTGAATT
TCACCAAGGG
(
2
)
6.5
0.0065
Cb medulloblastoma
ACTCTGAATT
TCACCAAGGG
(
2
)
34.6
0.0346
P8 GC+1d culture
ACTCTGAATT
AGAATATTTT (
2
)
9.1
0.0091
P8 GC+SHH+1d culture
ACTCTGAATT
AGAATATTTT (
2
)
AGGATAGATG (
2
)
11.8
0.0118
3T3 fibroblasts
TGTGTCAGCC
(
2
)
3.5
0.0035
P1 cortex
ACTCTGAATT
4.5
0.0045
Hypothalamus
ACTCTGAATT
TCACCAAGGG
(
2
)
7.2
0.0072
E12.5 retina
ACTCTGAATT
11.3
0.0113
E14.5 retina
AAAATATTTT
(
4
)
ACTCTGAATT
12.7
0.0127
E16.5 retina
ACTCTGAATT
TCACCAAGGG
(
2
)
10.9
0.0109
E18.5 retina
AAAATATTTT
(
4
)
ACTCTGAATT
9.1
0.0091
P0.5 retina
AGAATATTTT (
2
)
2
0.002
P2.5 retina
ACTCTGAATT
AGAATATTTT (
2
)
TCACCAAGGG
(
2
)
5.4
0.0054
P4.5 retina
AAAATATTTT
(
4
)
ACTCTGAATT
TGTGTCAGCC
(
2
)
6
0.006
P6.5 retina
ACTCTGAATT
TCACCAAGGG
(
2
)
TGTGTCAGCC
(
2
)
8.3
0.0083
P10.5 crx+ retina
ACTCTGAATT
AGGATAGATG (
2
)
TCACCAAGGG
(
2
)
9.5
0.0095
Adult retinal
ACTCTGAATT
AGGATAGATG (
2
)
TCACCAAGGG
(
2
)
5.7
0.0057
ONL
AAAATATTTT
(
4
)
TCACCAAGGG
(
2
)
5.7
0.0057
