Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.153111
0610042C05Rik
RIKEN cDNA 0610042C05 gene
10
66084
Mm.153111
9430013L17Rik
RIKEN cDNA 9430013L17 gene
10
77266
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCATCCAGGC (
2
)
GAAATTGAAA
3.2
0.0032
Cb medulloblastoma
GAAATTGAAA
2.3
0.0023
P8 GC+1d culture
AAAGCACCAC
(
2
)
AATGAAAACT (
3
)
3.4
0.0034
P8 GC+SHH+1d culture
AAAGCACCAC
(
2
)
AATGAAAACT (
3
)
GAAATTGAAA
4.7
0.0047
3T3 fibroblasts
AAAGCACCAC
(
2
)
ACCCACAAAC
(
2
)
17.5
0.0175
E15 cortex
CCATCCAGGC (
2
)
4.9
0.0049
P1 cortex
CCATCCAGGC (
2
)
GAAATTGAAA
13.6
0.0136
Hypothalamus
CCATCCAGGC (
2
)
GAAATTGAAA
TGGTGGGAGG
10.8
0.0108
E12.5 retina
AAAGCACCAC
(
2
)
GAAATTGAAA
3.8
0.0038
E14.5 retina
AAAGCACCAC
(
2
)
GAAATTGAAA
3.6
0.0036
E16.5 retina
TGGTGGGAGG
1.8
0.0018
E18.5 retina
GAAATTGAAA
1.8
0.0018
P0.5 retina
GAAATTGAAA
2
0.002
P2.5 retina
AAAGCACCAC
(
2
)
GAAATTGAAA
5.3
0.0053
P4.5 retina
CCATCCAGGC (
2
)
GAAATTGAAA
TGGTGGGAGG
6
0.006
P6.5 retina
TGGTGGGAGG
1.7
0.0017
P10.5 crx+ retina
GAAATTGAAA
TGGTGGGAGG
5.7
0.0057
Adult retinal
AAAGCACCAC
(
2
)
1.9
0.0019
ONL
AAAGCACCAC
(
2
)
CCATCCAGGC (
2
)
3.8
0.0038
