Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.153372	Brap	BRCA1 associated protein	5		72399
Gene Ontology	cytoplasm | ligase activity | MAPKKK cascade | nuclear localization sequence binding | protein ubiquitination | RAS protein signal transduction | ubiquitin ligase complex | ubiquitin-protein ligase activity | zinc ion binding
Human Homolog	BRAP[BRCA1 associated protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 43 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTAATTAAGA TTCATTATTG 14.7 0.0147 Cb medulloblastoma TTCATTATTG TTGGGATTTA 16.2 0.0162 P8 GC+1d culture TTCATTATTG TTGGGATTTA 18.2 0.0182 P8 GC+SHH+1d culture AAGGTCACAG (2) TCATAGAGAA TTCATTATTG 12.9 0.0129 3T3 fibroblasts AAGGTCACAG (2) 7 0.007 E15 cortex TTGGGATTTA 4.9 0.0049 P1 cortex TTCATTATTG 4.5 0.0045 Hypothalamus AAGGTCACAG (2) GCCCACTGCC TTCATTATTG TTGGGATTTA 32.5 0.0325 E12.5 retina AAGGTCACAG (2) TTCATTATTG 31.9 0.0319 E14.5 retina GCCCACTGCC TCATAGAGAA TTCATTATTG 18.2 0.0182 E16.5 retina AAGGTCACAG (2) TTCATTATTG TTGGGATTTA 19.9 0.0199 E18.5 retina TTCATTATTG TTGGGATTTA 27.2 0.0272 P0.5 retina CTAATTAAGA TTCATTATTG 5.9 0.0059 P2.5 retina AAGGTCACAG (2) CTAATTAAGA TCATAGAGAA TTCATTATTG TTGGGATTTA 21.2 0.0212 P4.5 retina CTAATTAAGA TTCATTATTG 9.9 0.0099 P6.5 retina TTCATTATTG 5 0.005 P10.5 crx- retina GCCCACTGCC TTCATTATTG 18.6 0.0186 P10.5 crx+ retina AAGGTCACAG (2) TTCATTATTG 7.7 0.0077 Adult retinal AAGGTCACAG (2) TTCATTATTG 7.5 0.0075 ONL TTCATTATTG 3.8 0.0038