Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1541	Snta1	syntrophin, acidic 1	2	2 84.0 cM	20648
Gene Ontology	actin binding | calcium ion binding | calmodulin binding | cytoskeleton | membrane | neuromuscular junction development | postsynaptic membrane | protein binding
Human Homolog	SNTA1[syntrophin, alpha 1 (dystrophin-associated protein A1, 59kDa, acidic component)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 21 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTAAAACTGA 11.4 0.0114 Cb medulloblastoma TTAAAACTGA 2.3 0.0023 P8 GC+1d culture TTAAAACTGA 6.8 0.0068 P8 GC+SHH+1d culture TTAAAACTGA 4.7 0.0047 Hypothalamus TTAAAACTGA 3.6 0.0036 E12.5 retina CTGCTCCGAC TTAAAACTGA 5.7 0.0057 E14.5 retina TTAAAACTGA 3.6 0.0036 E16.5 retina TTAAAACTGA 5.4 0.0054 E18.5 retina TTAAAACTGA 3.6 0.0036 P0.5 retina CTGCTCCGAC 2 0.002 P2.5 retina TTAAAACTGA 14.1 0.0141 P4.5 retina CTGCTCCGAC TTAAAACTGA 8 0.008 P6.5 retina CTGCTCCGAC TTAAAACTGA 11.7 0.0117 P10.5 crx- retina TTAAAACTGA 11.1 0.0111 P10.5 crx+ retina TTAAAACTGA 7.7 0.0077 Adult retinal CTGCTCCGAC TTAAAACTGA 9.3 0.0093 ONL TTAAAACTGA 1.9 0.0019