Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.154581	Aco2	aconitase 2, mitochondrial	10	10 13.0 cM	11429
Gene Ontology	aconitate hydratase activity | citrate metabolism | hydro-lyase activity | iron ion binding | lyase activity | metabolism | mitochondrion | mitochondrion | tricarboxylic acid cycle
Human Homolog	ACO2[aconitase 2, mitochondrial]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 154 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCCATTTT (3) ATGAGGGGAA (2) CAACTGTATT (2) GCTTGCTGCC GGAGCTGAAG (4) GGGTGAGGGT TGGACAAGCT (2) 71.7 0.0717 Cb medulloblastoma AAGCCATTTT (3) ATGAGGGGAA (2) CAACTGTATT (2) GCCTGGGATC (2) GGAGCTGAAG (4) GGGTGAGGGT TAAAGTACTC 34.5 0.0345 P8 GC+1d culture AAGCCATTTT (3) ATGAGGGGAA (2) CAACTGTATT (2) CAAGTGTATT CTCCAGGCTG GATGGCACCA (3) GCTTGCTGCC GGGTGAGGGT GTGACCAGAC TGGACAAGCT (2) 137.9 0.1379 P8 GC+SHH+1d culture AAGCCATTTT (3) ATGAGGGGAA (2) CAACTGTATT (2) CCAAAACAAA CTTTTTTAAA (2) GCTTGCTGCC GGGTGAGGGT TGGACAAGCT (2) 90.1 0.0901 3T3 fibroblasts AAGCCATTTT (3) GGGTGAGGGT TGGACAAGCT (2) 14 0.014 E15 cortex ACAAGTGGGG (2) CCTGCAGTCC (2) CTCCAGGCTG GATGGCACCA (3) GCTTGCTGCC TGGACAAGCT (2) 79 0.079 P1 cortex ATGAGGGGAA (2) CAACTGTATT (2) CCAAAACAAA CTTTTTTAAA (2) GCTTGCTGCC GGGTGAGGGT GTGACCAGAC TGGACAAGCT (2) 204.3 0.2043 Hypothalamus AAGCCATTTT (3) ACAAGTGGGG (2) ATGAGGGGAA (2) CAACTGTATT (2) CAGCACTGGA (2) CTCCAGGCTG GAAACCAGAC (2) GATGGCACCA (3) GGAGCTGAAG (4) GGGTGAGGGT TGGACAAGCT (2) 72.4 0.0724 E12.5 retina AAGCCATTTT (3) CAACTGTATT (2) CTTTTTTAAA (2) GAAACCAGAC (2) GGGTGAGGGT TGGACAAGCT (2) 41.4 0.0414 E14.5 retina AAGCCATTTT (3) CAACTGTATT (2) CCAAAACAAA CCTGCAGTCC (2) CTTTTTTAAA (2) GGCTGGGGAT GGGGGAAATA GTGACCAGAC TGGACAAGCT (2) 54.5 0.0545 E16.5 retina AAGCCATTTT (3) CAACTGTATT (2) CAGCACTGGA (2) CTCCAGGCTG GCTTGCTGCC GGGGGAAATA GGGTGAGGGT TGGACAAGCT (2) 45.2 0.0452 E18.5 retina AAGCCATTTT (3) CAACTGTATT (2) GGAGCTGAAG (4) GGGTGAGGGT TAAAGTACTC TGGACAAGCT (2) 43.6 0.0436 P0.5 retina AAGCCATTTT (3) ATGAGGGGAA (2) CAACTGTATT (2) CCAAAACAAA CCTGCAGTCC (2) CTTTTTTAAA (2) GCTTGCTGCC GGGTGAGGGT TAAAGTACTC TGGACAAGCT (2) 84.4 0.0844 P2.5 retina AAGCCATTTT (3) ACAAGTGGGG (2) ATGAGGGGAA (2) CAACTGTATT (2) CCAAAACAAA CCTGCAGTCC (2) CTTTTTTAAA (2) GAAACCAGAC (2) GGGGGAAATA GGGTGAGGGT TGGACAAGCT (2) 60.1 0.0601 P4.5 retina AAGCCATTTT (3) ATGAGGGGAA (2) CAACTGTATT (2) CTTTTTTAAA (2) GAAACCAGAC (2) GGGTGAGGGT TGGACAAGCT (2) 49.5 0.0495 P6.5 retina AAGCCATTTT (3) ATGAGGGGAA (2) CAACTGTATT (2) CCTGCAGTCC (2) CTTTTTTAAA (2) GCTTGCTGCC GGGTGAGGGT TAAAGTACTC TGGACAAGCT (2) 70.2 0.0702 P10.5 crx- retina AAGCCATTTT (3) ATGAGGGGAA (2) CAACTGTATT (2) CAGCACTGGA (2) CTTTTTTAAA (2) GCTTGCTGCC GGAGCTGAAG (4) GGGTGAGGGT TGGACAAGCT (2) 46.6 0.0466 P10.5 crx+ retina AAGCCATTTT (3) CAACTGTATT (2) CCAAAACAAA CCTGCAGTCC (2) GCTTGCTGCC GGAGCTGAAG (4) GGGTGAGGGT TGGACAAGCT (2) 42.1 0.0421 Adult retinal ATGAGGGGAA (2) CAACTGTATT (2) GGGTGAGGGT TGGACAAGCT (2) 20.4 0.0204 ONL AAGCCATTTT (3) ATGAGGGGAA (2) CAACTGTATT (2) CTTTTTTAAA (2) GGAGCTGAAG (4) GGCTGGGGAT TGGACAAGCT (2) 28.6 0.0286