Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.156565
Sidt2
SID1 transmembrane family, member 2
9
214597
Mm.156565
Pafah1b2
platelet-activating factor acetylhydrolase, isoform 1b, alpha2 subunit
9
18475
Mm.156565
C79017
expressed sequence C79017
9
97530
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTACGGTTGC
(
3
)
GTGGAGAGAA
(
3
)
TGAGGGCCAG
TTGGTCCTCT
(
3
)
27.7
0.0277
Cb medulloblastoma
TGAGGGCCAG
4.6
0.0046
P8 GC+1d culture
CTACGGTTGC
(
3
)
10.3
0.0103
P8 GC+SHH+1d culture
CTACGGTTGC
(
3
)
TGAGGGCCAG
TTGGTCCTCT
(
3
)
14.1
0.0141
3T3 fibroblasts
CTACGGTTGC
(
3
)
3.5
0.0035
E15 cortex
TGAGGGCCAG
4.9
0.0049
Hypothalamus
GTGGAGAGAA
(
3
)
TGAGGGCCAG
3.6
0.0036
E12.5 retina
TGAGGGCCAG
1.9
0.0019
E14.5 retina
CGCAGGCTTT
CTACGGTTGC
(
3
)
TGAGGGCCAG
10.9
0.0109
E16.5 retina
GTGGAGAGAA
(
3
)
TGAGGGCCAG
9
0.009
E18.5 retina
CGCAGGCTTT
CTACGGTTGC
(
3
)
TGAGGGCCAG
9
0.009
P0.5 retina
CTACGGTTGC
(
3
)
TGAGGGCCAG
11.8
0.0118
P2.5 retina
CTACGGTTGC
(
3
)
TGAGGGCCAG
8.8
0.0088
P4.5 retina
CTACGGTTGC
(
3
)
TGAGGGCCAG
7.9
0.0079
P6.5 retina
CTACGGTTGC
(
3
)
TGAGGGCCAG
6.6
0.0066
P10.5 crx- retina
CTACGGTTGC
(
3
)
TGAGGGCCAG
11.1
0.0111
P10.5 crx+ retina
CGCAGGCTTT
CTACGGTTGC
(
3
)
TGAGGGCCAG
11.5
0.0115
Adult retinal
CTACGGTTGC
(
3
)
TGAGGGCCAG
7.4
0.0074
ONL
TGAGGGCCAG
1.9
0.0019
