Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1568	Grn	granulin	11	11 60.0 cM	14824
Gene Ontology	calcium ion binding | cytokine activity | extracellular space | lipid catabolism | mitochondrion | phospholipase A2 activity
Human Homolog	GRN[granulin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 151 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTTTTTTTT (4) GCCACCGTCC (2) GCCTAAAATA GGAGGTGGAA (2) GGAGGTGGAG (2) GGCTAAAATA GGGGCCTCTG GGTGCCTCCT 57 0.057 Cb medulloblastoma GAAGGTGGAA GAGGTGACTG (2) GCCACCGTCC (2) GGCACTGTCC GGCTAAAATA GGGGCCTCTG 145.5 0.1455 P8 GC+1d culture ATTTTTTTTT (4) GCCAATGTCC (2) GCCTAAAATA GGAGGTGGAG (2) GGCACTGTCC GGGCAGCTGG GGGGCCTCTG GGTGCCTCCT TTTTTGAGGG 65 0.065 P8 GC+SHH+1d culture ATTTTTTTTT (4) GCCACCGTCC (2) GCCTAAAATA GGAGGTGGAA (2) GGAGGTGGAG (2) GGCACTGTCC GGCTAAAATA GGGCAGCTGG GGGCCCTCTG GGGCCTCTGG GGGGCCTCTG GGTGCCTCCT 63.2 0.0632 3T3 fibroblasts GCCACCGTCC (2) GGAGGTGGAA (2) GGAGGTGGAG (2) GGCTAAAATA GGGCAGCTGG 52.5 0.0525 E15 cortex GGAGGTGGAG (2) GGCACTGTCC GGGGCCTCTG 49.4 0.0494 P1 cortex ATTTTTTTTT (4) GGCTAAAATA GGGGCCTCTG 13.5 0.0135 Hypothalamus GGAGGTGGAA (2) GGAGGTGGAG (2) GGCTAAAATA GGGCAGCTGG GGGCCTCTGG GGGCTCCTTG (2) GGGGCCTCTG 36.1 0.0361 E12.5 retina GAAGGTGGAA GCCACCGTCC (2) GCCACTGTCC (2) GGAGGTGGAA (2) GGCACTGTCC GGCTAAAATA GGGCAGCTGG GGGCCTCTGG GGGGCCTCTG 43.4 0.0434 E14.5 retina ATTTTTTTTT (4) GAGGTGACTG (2) GCCACCGTCC (2) GGAGGTGGAA (2) GGAGGTGGAG (2) GGCACTGTCC GGCTAAAATA GGGCTCCTTG (2) GGGGCCTCTG GTGATGGGGT (2) 34.5 0.0345 E16.5 retina GCCAATGTCC (2) GGAGGTGGAG (2) GGCTAAAATA GGGCAGCTGG GGGCCTCTGG GGGGCCTCTG GTGATGGGGT (2) 37.9 0.0379 E18.5 retina ATTTTTTTTT (4) GGAGGTGGAA (2) GGAGGTGGAG (2) GGCTAAAATA GGGCCTCTGG GGGGCCTCTG GTGATGGGGT (2) 41.7 0.0417 P0.5 retina ATTTTTTTTT (4) GCCACCGTCC (2) GGAGGTGGAG (2) GGCACTGTCC GGCTAAAATA GGGCAGCTGG GGGCCTCTGG GGGGCCTCTG 41.2 0.0412 P2.5 retina ATTTTTTTTT (4) GAAGGTGGAA GGAGGTGGAG (2) GGCACTGTCC GGCTAAAATA GGGCAGCTGG GGGCCTCTGG GGGCTCCTTG (2) GGGGCCTCTG GTGATGGGGT (2) 61.6 0.0616 P4.5 retina ATTTTTTTTT (4) GGAGGTGGAA (2) GGAGGTGGAG (2) GGCTAAAATA GGGCAGCTGG GGGCCCTCTG GGGCCTCTGG GGGGCCTCTG 53.6 0.0536 P6.5 retina GAAGGTGGAA GCCAATGTCC (2) GGAGGTGGAG (2) GGCACTGTCC GGCTAAAATA GGGCAGCTGG GGGCCTCTGG GGGGCCTCTG GGTGCCTCCT 53.4 0.0534 P10.5 crx- retina GCCACCGTCC (2) GCCTAAAATA GGAGGTGGAG (2) GGCACTGTCC GGCTAAAATA GGGCAGCTGG GGGCCCTCTG GGGGCCTCTG 74.5 0.0745 P10.5 crx+ retina GCCACCGTCC (2) GCCTAAAATA GGAGGTGGAG (2) GGCACTGTCC GGCTAAAATA GGGCCCTCTG GGGCCTCTGG GGGGCCTCTG 126.8 0.1268 Adult retinal GAGGTGACTG (2) GGAGGTGGAG (2) GGCACTGTCC GGCTAAAATA GGGCAGCTGG GGGCCCTCTG GGGCCTCTGG GGGCTCCTTG (2) GGGGCCTCTG 35.5 0.0355 ONL GGAGGTGGAA (2) GGAGGTGGAG (2) GGGCAGCTGG GGGCCTCTGG GGGGCCTCTG 15.2 0.0152