| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GGTGGACTCT (2) TACGAAAATG (2)
| 3.2 | 0.0032 |
| Cb medulloblastoma | GGTGGACTCT (2) TACGAAAATG (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | GGTGGACTCT (2)
| 1.1 | 0.0011 |
| P8 GC+SHH+1d culture | TACGAAAATG (2)
| 1.2 | 0.0012 |
| 3T3 fibroblasts | TACGAAAATG (2)
| 14 | 0.014 |
| E15 cortex | AAAAATGAGA (2)
| 4.9 | 0.0049 |
| P1 cortex | TACGAAAATG (2)
| 9.1 | 0.0091 |
| Hypothalamus | AGAAAGGGCA TACGAAAATG (2) TCAGAATACT (2)
| 7.2 | 0.0072 |
| E12.5 retina | AGGACTGCCA (2) TACGAAAATG (2) TCAGAATACT (2)
| 15.1 | 0.0151 |
| E14.5 retina | AAAAATGAGA (2) GGTGGACTCT (2) TACGAAAATG (2) TCAGAATACT (2)
| 45.5 | 0.0455 |
| E16.5 retina | TACGAAAATG (2) TCAGAATACT (2)
| 5.4 | 0.0054 |
| E18.5 retina | TACGAAAATG (2) TCAGAATACT (2)
| 7.3 | 0.0073 |
| P0.5 retina | AGAAAGGGCA GGTGGACTCT (2) TACGAAAATG (2)
| 9.9 | 0.0099 |
| P2.5 retina | TACGAAAATG (2) TCAGAATACT (2)
| 8.8 | 0.0088 |
| P4.5 retina | AGGACTGCCA (2) TACGAAAATG (2)
| 15.9 | 0.0159 |
| P6.5 retina | TACGAAAATG (2) TCAGAATACT (2)
| 3.4 | 0.0034 |
| P10.5 crx- retina | AGAAAGGGCA
| 1.9 | 0.0019 |
| P10.5 crx+ retina | AGGACTGCCA (2) TCAGAATACT (2)
| 3.8 | 0.0038 |
| ONL | AAAAATGAGA (2)
| 5.7 | 0.0057 |