Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.15711	Cnp1	cyclic nucleotide phosphodiesterase 1	11	11 60.0 cM	12799
Gene Ontology	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity | cyclic nucleotide catabolism | hydrolase activity | membrane
Human Homolog	CNP[2',3'-cyclic nucleotide 3' phosphodiesterase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAGGGAGAA CAGGCAAAGA CCTTCCACCT (2) CCTTCCACTG (3) CTGCTGGAGA (2) GTGCTGGAGA (3) TTAATCCCAA TTAATCCCAG 21.2 0.0212 Cb medulloblastoma CCTTCCACCT (2) CCTTCCACTG (3) GAGGAGGGAG (2) TTAATCCCAA 48.5 0.0485 P8 GC+1d culture CAAGGGAGAA CAGGCAAGAT (2) CCTTCCACCT (2) CCTTCCACTG (3) GAGGAGGGAG (2) GGCTGGGCAG (2) GTGCTGGAGA (3) 12.3 0.0123 P8 GC+SHH+1d culture CCTTCCACCT (2) GAGGAGGGAG (2) GGCTGGGCAG (2) TTAATCCCAA 7 0.007 3T3 fibroblasts CAGGCAAGAT (2) GAGGAGGGAG (2) GGCTGGGCAG (2) 14 0.014 E15 cortex GAGGAGGGAG (2) GTGCTGGAGA (3) TAGGCCAGAA 19.7 0.0197 P1 cortex GAGGAGGGAG (2) 4.5 0.0045 Hypothalamus CAGGCAAGAT (2) CCTTCCACCT (2) CTGCTGGAGA (2) TTAATCCCAA 34.3 0.0343 E12.5 retina GAGGAGGGAG (2) 5.6 0.0056 E14.5 retina CAGGCAAAGA CAGGCAAGAT (2) GTGCTGGAGA (3) 7.2 0.0072 E16.5 retina CCTTCCACTG (3) CTGCTGGAGA (2) GAGGAGGGAG (2) 7.2 0.0072 E18.5 retina AGCAGGTTTG TTAATCCCAA 14.5 0.0145 P0.5 retina CAAGGGAGAA CAGGCAAAGA CCTTCCACCT (2) GAGGAGGGAG (2) TTAATCCCAA 19.8 0.0198 P2.5 retina CCTTCCACCT (2) CTGCTGGAGA (2) GTGCTGGAGA (3) TAGGCCAGAA TTAATCCCAA 14.2 0.0142 P4.5 retina AGCAGGTTTG CAGGCAAAGA CCTTCCACCT (2) GGCTGGGCAG (2) GTGCTGGAGA (3) TTAATCCCAA 33.8 0.0338 P6.5 retina CAGGCAAAGA CCTTCCACTG (3) GAGGAGGGAG (2) GGCTGGGCAG (2) TTAATCCCAA 11.7 0.0117 P10.5 crx- retina AGCAGGTTTG CCTTCCACCT (2) CCTTCCACTG (3) GAGGAGGGAG (2) GGCTGGGCAG (2) GTGCTGGAGA (3) 20.5 0.0205 P10.5 crx+ retina CCTTCCACTG (3) TTAATCCCAA TTAATCCCAG 5.7 0.0057 Adult retinal GAGGAGGGAG (2) GTGCTGGAGA (3) 13 0.013 ONL CAGGCAAAGA CAGGCAAGAT (2) GAGGAGGGAG (2) GGCTGGGCAG (2) GTGCTGGAGA (3) 13.3 0.0133