Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.157778	2610034E13Rik	RIKEN cDNA 2610034E13 gene	7	7 7.0 cM	75613
Human Homolog	ARC92[ARC/mediator transcriptional coactivator subunit]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 104 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CGCCTGGCAG CGTTCACCAT GACCTCATCT GCAAAAAAAA (2) TGGTGTTTGT (5) 21.1 0.0211 Cb medulloblastoma CGTTCACCAT GAATAAAAAC (5) GAATAAAACA GACCTCATCT GCAAAAAAAA (2) TGGTGTTTGT (5) 85.5 0.0855 P8 GC+1d culture ACCAGTGGCC CGTTCACCAT GAATAAAAAC (5) GAATAAAACA GACCTCATCT GCAAAAAAAA (2) GGCCTCATCC (2) 34.2 0.0342 P8 GC+SHH+1d culture CGTTCACCAT CTCTGATGTG (2) GAATAAAAAC (5) GAATAAAACA GACCTCATCT GCAAAAAAAA (2) 48 0.048 3T3 fibroblasts CAGTGCAGTG (3) GCAAAAAAAA (2) 7 0.007 E15 cortex CAGTGCAGTG (3) CGTTCACCAT GACCTCATCT GCAAAAAAAA (2) 29.6 0.0296 P1 cortex CGTTCACCAT CTCTGATGTG (2) GACCTCATCT GCAAAAAAAA (2) 22.6 0.0226 Hypothalamus CAGTGCAGTG (3) CGCCTGGCAG CTCTGATGTG (2) GAATAAAAAC (5) GAATAAAACA GACCTCATCT GCAAAAAAAA (2) GGCCTCATCC (2) 48.7 0.0487 E12.5 retina ACCAGTGGCC CGTTCACCAT CTCTGATGTG (2) GAATAAAAAC (5) GACCTCATCT GCAAAAAAAA (2) 35.7 0.0357 E14.5 retina GAATAAAAAC (5) GAATAAAACA GACCTCATCT GCAAAAAAAA (2) 27.3 0.0273 E16.5 retina CTCTGATGTG (2) GAATAAAACA GACCTCATCT GCAAAAAAAA (2) 28.9 0.0289 E18.5 retina CGTTCACCAT GAATAAAACA GACCTCATCT GCAAAAAAAA (2) 43.8 0.0438 P0.5 retina CTCTGATGTG (2) GACCTCATCT GCAAAAAAAA (2) 41.3 0.0413 P2.5 retina ACCAGTGGCC CGTTCACCAT CTCTGATGTG (2) GAATAAAAAC (5) GACCTCATCT GCAAAAAAAA (2) GGCCTCATCC (2) TGGTGTTTGT (5) 65.3 0.0653 P4.5 retina CGTTCACCAT CTCTGATGTG (2) GAATAAAAAC (5) GAATAAAACA GACCTCATCT GCAAAAAAAA (2) 65.5 0.0655 P6.5 retina CGTTCACCAT CTCTGATGTG (2) GAATAAAAAC (5) GAATAAAACA GACCTCATCT GCAAAAAAAA (2) 43.5 0.0435 P10.5 crx- retina CGCCTGGCAG CGTTCACCAT CTCTGATGTG (2) GACCTCATCT GCAAAAAAAA (2) GGCCTCATCC (2) 28 0.028 P10.5 crx+ retina CGTTCACCAT CTCTGATGTG (2) GACCTCATCT GCAAAAAAAA (2) 17.3 0.0173 Adult retinal ACCAGTGGCC CGTTCACCAT CTCTGATGTG (2) GACCTCATCT GCAAAAAAAA (2) GGCCTCATCC (2) 31.6 0.0316 ONL CGTTCACCAT CTCTGATGTG (2) GAATAAAAAC (5) GACCTCATCT GCAAAAAAAA (2) 21 0.021