Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.158868	Lrrn1	leucine rich repeat protein 1, neuronal	6		16979
Gene Ontology	extracellular space | integral to membrane
Human Homolog	LRRN1[leucine rich repeat neuronal 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACATTAAAAA GCTGAGCCAG (2) GTAATTGTTA 9.8 0.0098 Cb medulloblastoma ACATTAAAAA ACATTGGAAA GTAATTGTTA TAGTTCATTA 36.9 0.0369 P8 GC+1d culture ACATTAAAAA GCCAGATTGA (2) GCTGAGCCAG (2) GTAATTGTTA TAGTTCATTA 14.8 0.0148 P8 GC+SHH+1d culture ACATTAAAAA ACATTGGAAA GTAATTGTTA 9.4 0.0094 3T3 fibroblasts GCCAGATTGA (2) 7 0.007 E15 cortex GCCAGATTGA (2) GCTGAGCCAG (2) 9.8 0.0098 P1 cortex GTAATTGTTA 4.5 0.0045 Hypothalamus ACATTAAAAA 3.6 0.0036 E12.5 retina ACATTAAAAA 3.8 0.0038 E14.5 retina ACATTAAAAA ACATTGGAAA GTAATTGTTA 12.7 0.0127 E16.5 retina ACATTAAAAA GCCAGATTGA (2) 5.4 0.0054 E18.5 retina ACATTAAAAA GTAATTGTTA 5.4 0.0054 P0.5 retina GCCAGATTGA (2) 2 0.002 P2.5 retina ACATTAAAAA GTAATTGTTA 7.1 0.0071 P4.5 retina ACATTAAAAA GTAATTGTTA 11.9 0.0119 P6.5 retina ACATTAAAAA 6.7 0.0067 P10.5 crx- retina ACATTAAAAA GTAATTGTTA TAGTTCATTA 20.5 0.0205 P10.5 crx+ retina ACATTAAAAA 3.8 0.0038 ONL ACATTAAAAA 3.8 0.0038