| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAAAAAAAA (2) TTCCTTGTTA (3)
| 205.5 | 0.2055 |
| Cb medulloblastoma | AAAAAAAAAA (2)
| 797.8 | 0.7978 |
| P8 GC+1d culture | AAAAAAAAAA (2) GAGGCTGGGA (5) GGGAGGAGAG (2)
| 206.5 | 0.2065 |
| P8 GC+SHH+1d culture | AAAAAAAAAA (2) GAGGCTGGGA (5) GGGAGGAGAG (2)
| 283.4 | 0.2834 |
| 3T3 fibroblasts | AAAAAAAAAA (2) GGGAGGAGAG (2) GTAAAGAAGC
| 38.5 | 0.0385 |
| E15 cortex | AAAAAAAAAA (2)
| 212.8 | 0.2128 |
| P1 cortex | AAAAAAAAAA (2) GGGAGGAGAG (2) GTAAAGAAGC
| 254.4 | 0.2544 |
| Hypothalamus | AAAAAAAAAA (2) GGGAGGAGAG (2) TTCCTTGTTA (3)
| 126.8 | 0.1268 |
| E12.5 retina | AAAAAAAAAA (2) GGGAGGAGAG (2)
| 140.8 | 0.1408 |
| E14.5 retina | AAAAAAAAAA (2)
| 94.7 | 0.0947 |
| E16.5 retina | AAAAAAAAAA (2)
| 43.5 | 0.0435 |
| E18.5 retina | AAAAAAAAAA (2)
| 374.7 | 0.3747 |
| P0.5 retina | AAAAAAAAAA (2) GAGGCTGGGA (5) TTCCTTGTTA (3)
| 123.7 | 0.1237 |
| P2.5 retina | AAAAAAAAAA (2) GTAAAGAAGC
| 330.9 | 0.3309 |
| P4.5 retina | AAAAAAAAAA (2) GGGAGGAGAG (2)
| 287.3 | 0.2873 |
| P6.5 retina | AAAAAAAAAA (2) GAGGCTGGGA (5)
| 271.8 | 0.2718 |
| P10.5 crx- retina | AAAAAAAAAA (2)
| 44.6 | 0.0446 |
| P10.5 crx+ retina | AAAAAAAAAA (2) GGGAGGAGAG (2)
| 98 | 0.098 |
| Adult retinal | AAAAAAAAAA (2) TTCCTTGTTA (3)
| 59.3 | 0.0593 |
| ONL | AAAAAAAAAA (2) GGGAGGAGAG (2) TTCCTTGTTA (3)
| 107.2 | 0.1072 |