| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAACAGAAT (3) AAGCCATTTT (3) CTTCCAGTTG (2)
| 11.4 | 0.0114 |
| Cb medulloblastoma | AAGCCATTTT (3) CTTCCAGTTG (2)
| 11.5 | 0.0115 |
| P8 GC+1d culture | AAGCCATTTT (3) TGTCTTCAGT TTTCTTCAGT (2)
| 11.3 | 0.0113 |
| P8 GC+SHH+1d culture | AAGCCATTTT (3) CTTTCCCTGT (3) TCAGTATTTG (2) TTTCTTCAGT (2)
| 10.6 | 0.0106 |
| 3T3 fibroblasts | AAGCCATTTT (3)
| 3.5 | 0.0035 |
| E15 cortex | AAAACAGAAT (3)
| 4.9 | 0.0049 |
| Hypothalamus | AAGCCATTTT (3) CTTCCAGTTG (2) TTTCTTCAGT (2)
| 5.4 | 0.0054 |
| E12.5 retina | AAGCCATTTT (3) TGTCTTCAGT
| 5.7 | 0.0057 |
| E14.5 retina | AAGCCATTTT (3) CTTCCAGTTG (2)
| 7.3 | 0.0073 |
| E16.5 retina | AAGCCATTTT (3) TGTCTTCAGT TTTCTTCAGT (2)
| 5.4 | 0.0054 |
| E18.5 retina | AAGCCATTTT (3) TCAGTATTTG (2)
| 5.4 | 0.0054 |
| P0.5 retina | AAGCCATTTT (3) CTTCCAGTTG (2) CTTTCCCTGT (3)
| 9.9 | 0.0099 |
| P2.5 retina | AAGCCATTTT (3) CTTCCAGTTG (2) TCAGTATTTG (2)
| 12.4 | 0.0124 |
| P4.5 retina | AAGCCATTTT (3) CTTCCAGTTG (2) TTTCTTCAGT (2)
| 11.9 | 0.0119 |
| P6.5 retina | AAGCCATTTT (3) TCAGTATTTG (2)
| 3.4 | 0.0034 |
| P10.5 crx- retina | AAGCCATTTT (3) CTTCCAGTTG (2) TCAGTATTTG (2)
| 9.4 | 0.0094 |
| P10.5 crx+ retina | AAGCCATTTT (3) TGTCTTCAGT
| 7.7 | 0.0077 |
| Adult retinal | CTTCCAGTTG (2) TCAGTATTTG (2)
| 3.8 | 0.0038 |
| ONL | AAAACAGAAT (3) AAGCCATTTT (3)
| 5.7 | 0.0057 |