Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.165042	Ctdsp1	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1	1		227292
Gene Ontology	hydrolase activity | nucleus | phosphoprotein phosphatase activity
Human Homolog	CTDSP1[CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GACTGATAAA GCCCCCCGCT 26.1 0.0261 Cb medulloblastoma GACTGATAAA GAGGACAGTG GGGGGAGGGG (4) 11.5 0.0115 P8 GC+1d culture GACTGATAAA GCACGAGCTC GCCCCCCGCT GGGGGAGGGG (4) 18.3 0.0183 P8 GC+SHH+1d culture GACTGATAAA GCACGAGCTC GCCCCCCGCT 18.7 0.0187 3T3 fibroblasts GCCCCCCGCT GGGGGAGGGG (4) 35 0.035 E15 cortex GACTGATAAA GCCCCCCGCT 19.7 0.0197 P1 cortex GACTGATAAA GGGGGAGGGG (4) 22.7 0.0227 Hypothalamus GCACGAGCTC GCCCCCCGCT 3.6 0.0036 E12.5 retina GCACGAGCTC GCCCCCCGCT GGGGGAGGGG (4) 15.1 0.0151 E14.5 retina GACTGATAAA GAGGACAGTG GCACGAGCTC GCCCCCCGCT 12.7 0.0127 E16.5 retina CAGGATGGAA 1.8 0.0018 E18.5 retina CAGGATGGAA GACTGATAAA GCACGAGCTC GCCCCCCGCT GGGGGAGGGG (4) 9 0.009 P0.5 retina GCCCCCCGCT 2 0.002 P2.5 retina GACTGATAAA GAGGACAGTG GCACGAGCTC GCCCCCCGCT GGGGGAGGGG (4) 14.2 0.0142 P4.5 retina GACTGATAAA GCACGAGCTC 15.8 0.0158 P6.5 retina CAGGATGGAA GACTGATAAA GCACGAGCTC GCCCCCCGCT GGGGGAGGGG (4) 13.4 0.0134 P10.5 crx- retina GCCCCCCGCT GGGGGAGGGG (4) 3.8 0.0038 P10.5 crx+ retina CAGGATGGAA GCACGAGCTC GCCCCCCGCT GGGGGAGGGG (4) 7.6 0.0076 Adult retinal GCACGAGCTC GCCCCCCGCT GGGGGAGGGG (4) 7.5 0.0075