| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GAGAAAACCA GAGAAACCCA (3) GGTTACTGAA TGTGTGTATG (3) TTCTCTTGCA
| 9.7 | 0.0097 |
| Cb medulloblastoma | GAGAAACCCA (3) GGTTACTGAA
| 6.9 | 0.0069 |
| P8 GC+1d culture | GAGAAACCCA (3) GGTTACTGAA TGTGTGTATG (3) TTCTCTTGCA
| 12.6 | 0.0126 |
| P8 GC+SHH+1d culture | GAGAAAACCA GAGAAACCCA (3) TTCTCTTGCA
| 10.6 | 0.0106 |
| 3T3 fibroblasts | GAGAAACCCA (3)
| 3.5 | 0.0035 |
| E15 cortex | GAGAAACCCA (3)
| 4.9 | 0.0049 |
| P1 cortex | GAGAAACCCA (3)
| 4.5 | 0.0045 |
| Hypothalamus | GAGAAACCCA (3) GGTTACTGAA TGTGTGTATG (3) TTCTCTTGCA
| 9 | 0.009 |
| E12.5 retina | GAGAAACCCA (3)
| 3.8 | 0.0038 |
| E14.5 retina | GAGAAACCCA (3)
| 5.5 | 0.0055 |
| E16.5 retina | GAGAAACCCA (3) GGTTACTGAA TGTGTGTATG (3)
| 9 | 0.009 |
| E18.5 retina | GAGAAACCCA (3) TGTGTGTATG (3) TTCTCTTGCA
| 10.9 | 0.0109 |
| P0.5 retina | GAGAAACCCA (3)
| 9.8 | 0.0098 |
| P2.5 retina | GAGAAACCCA (3) GGTTACTGAA
| 12.3 | 0.0123 |
| P4.5 retina | GAGAAACCCA (3)
| 11.9 | 0.0119 |
| P6.5 retina | GAGAAACCCA (3) TTCTCTTGCA
| 5 | 0.005 |
| P10.5 crx- retina | GAGAAACCCA (3) TTCTCTTGCA
| 13 | 0.013 |
| P10.5 crx+ retina | GAGAAAACCA GGTTACTGAA TTCTCTTGCA
| 5.7 | 0.0057 |
| Adult retinal | TTCTCTTGCA
| 1.9 | 0.0019 |
| ONL | GAGAAACCCA (3) GGTTACTGAA TGTGTGTATG (3)
| 5.7 | 0.0057 |