Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.170002
AI848100
expressed sequence AI848100
1
226551
Gene Ontology
protein targeting
Human Homolog
C1orf9[chromosome 1 open reading frame 9]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 31 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTCTCCAAGG
TATTTTGTGG (
2
)
TTTGCTTTCG
9.8
0.0098
Cb medulloblastoma
GTGGAAGAAT (
2
)
TATTTTGTGG (
2
)
20.8
0.0208
P8 GC+1d culture
TATTTTGTGG (
2
)
TTTGCTTTCG
2.2
0.0022
P8 GC+SHH+1d culture
GTCTCCAAGG
GTGGAAGAAT (
2
)
TTTGCTTTCG
5.8
0.0058
P1 cortex
AATTTGAAAA
(
2
)
TAAGCTTGAA
TATTTTGTGG (
2
)
TTTGCTTTCG
27.1
0.0271
Hypothalamus
GTGGAAGAAT (
2
)
TAAGCTTGAA
9
0.009
E12.5 retina
TATTTTGTGG (
2
)
1.9
0.0019
E14.5 retina
AATTTGAAAA
(
2
)
1.8
0.0018
E18.5 retina
GTGGAAGAAT (
2
)
3.6
0.0036
P0.5 retina
GTCTCCAAGG
TTTGCTTTCG
4
0.004
P2.5 retina
GTGGAAGAAT (
2
)
1.8
0.0018
P6.5 retina
GTGGAAGAAT (
2
)
TTTGCTTTCG
5
0.005
P10.5 crx- retina
TAAGCTTGAA
1.9
0.0019
P10.5 crx+ retina
GTGGAAGAAT (
2
)
TAAGCTTGAA
TATTTTGTGG (
2
)
7.6
0.0076
Adult retinal
GTGGAAGAAT (
2
)
TATTTTGTGG (
2
)
13
0.013
ONL
TATTTTGTGG (
2
)
13.4
0.0134
