Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.170515	Nfkbia	nuclear factor of kappa light chain gene enhancer in B-cells inhibitor, alpha	12		18035
Gene Ontology	cytoplasm | cytosol | nucleus | protein binding | protein-nucleus import, translocation | regulation of cell proliferation
Human Homolog	NFKBIA[nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTGCCGCGGG GCCGGACAGC (2) TGCTTAAAAG (2) 6.5 0.0065 Cb medulloblastoma GAACGTCATT TGCACAAAAG TGCTTAAAAG (2) 6.9 0.0069 P8 GC+1d culture AACCTTAAGA GAACGTCATT GGAGGACACA (2) TGCTTAAAAA TGCTTAAAAG (2) 17 0.017 P8 GC+SHH+1d culture CAGGCCACCA GAAGTCATTG GGAGGACACA (2) TGCTTAAAAG (2) 9.3 0.0093 3T3 fibroblasts GAACGTCATT GAAGTCATTG 7 0.007 E15 cortex GTGGAAAATG 4.9 0.0049 P1 cortex TGCTTAAAAG (2) 4.5 0.0045 Hypothalamus CTGCCGCGGG GCCGGACAGC (2) 3.6 0.0036 E12.5 retina GAACGTCATT TGCTTAAAAA TGCTTAAAAG (2) 7.6 0.0076 E14.5 retina GAAGTCATTG GGAGGACACA (2) TGCTTAAAAA 7.2 0.0072 E16.5 retina TGCACAAAAG 1.8 0.0018 E18.5 retina AACCTTAAGA CAGGCCACCA TGCTTAAAAA TGCTTAAAAG (2) 9 0.009 P0.5 retina GAAGTCATTG TGCTTAAAAG (2) 5.9 0.0059 P2.5 retina GAAGTCATTG TGCTTAAAAA 3.6 0.0036 P4.5 retina TGCTTAAAAG (2) 2 0.002 P6.5 retina GGAGGACACA (2) TGCTTAAAAG (2) 5 0.005 P10.5 crx- retina GAACGTCATT GAAGTCATTG GTGGAAAATG TGCTTAAAAG (2) 52.1 0.0521 P10.5 crx+ retina CTGCCGCGGG GAAGTCATTG GTGGAAAATG TGCTTAAAAG (2) 11.5 0.0115 Adult retinal GAAGTCATTG GCCGGACAGC (2) GGAGGACACA (2) 5.7 0.0057 ONL CAGGCCACCA TGCACAAAAG 3.8 0.0038