| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | CTTGCTCGGG (2) GACTGAAGCC (2)
| 4.9 | 0.0049 |
| P8 GC+1d culture | ACCAACAGAG (2) CTTGCTCGGG (2) GAAGGGCCAA (4) GACTGAAGCC (2) GCCACTGCCT GCTTGGGGGC (2)
| 12.5 | 0.0125 |
| P8 GC+SHH+1d culture | ACCAACAGAG (2) GAAGGGCCAA (4) GCCACTGCCT
| 7 | 0.007 |
| 3T3 fibroblasts | CCTGGGCTGG GAAGGGCCAA (4) GCCACTGCCT
| 21 | 0.021 |
| E15 cortex | ACCAACAGAG (2) GAAGGGCCAA (4)
| 9.8 | 0.0098 |
| Hypothalamus | ACCAACAGAG (2) CTTGCTCGGG (2) GACTGAAGCC (2) GCCACTGCCT
| 10.8 | 0.0108 |
| E12.5 retina | CTTGCTCGGG (2) GAAGGGCCAA (4) GAGACTGCAT (2) GCCACTGCCT
| 9.5 | 0.0095 |
| E14.5 retina | ACCAACAGAG (2) GAAGGGCCAA (4)
| 3.6 | 0.0036 |
| E16.5 retina | ACCAACAGAG (2) GCCACTGCCT GCTTGGGGGC (2)
| 14.4 | 0.0144 |
| E18.5 retina | GAAGGGCCAA (4) GCCACTGCCT
| 3.6 | 0.0036 |
| P0.5 retina | GAAGGGCCAA (4) GCCACTGCCT
| 7.9 | 0.0079 |
| P2.5 retina | ACCAACAGAG (2) GAAGGGCCAA (4)
| 10.5 | 0.0105 |
| P4.5 retina | CTTGCTCGGG (2) GAGACTGCAT (2) GCCACTGCCT
| 11.9 | 0.0119 |
| P6.5 retina | ACCAACAGAG (2) GCCACTGCCT
| 6.7 | 0.0067 |
| P10.5 crx- retina | GAAGGGCCAA (4) GCCACTGCCT
| 5.6 | 0.0056 |
| P10.5 crx+ retina | GAAGGGCCAA (4) GCCACTGCCT
| 7.7 | 0.0077 |
| Adult retinal | ACCAACAGAG (2) CTTGCTCGGG (2) GCTTGGGGGC (2)
| 13.1 | 0.0131 |
| ONL | ACCAACAGAG (2) CCTGGGCTGG
| 3.8 | 0.0038 |