| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | ATGTTTGTGC (2) GCCTCTGCAT (2) TAGTTTGTAA
| 16.4 | 0.0164 |
| Cb medulloblastoma | GAGGGATGTT GCCTCTGCAT (2) TAGTTTGTAA
| 11.5 | 0.0115 |
| P8 GC+1d culture | ATGTTTGTGC (2) GCCTCTGCAT (2) TAGTTTGTAA
| 30.7 | 0.0307 |
| P8 GC+SHH+1d culture | AGTCCTAGCT ATGTTTGTGC (2) GAGGGATGTT GCCTCTGCAT (2) TAGTTTGTAA TGGACCTGAC (2)
| 20.1 | 0.0201 |
| 3T3 fibroblasts | ATGTTTGTGC (2) GAGGGATGTT GCCTCTGCAT (2)
| 14 | 0.014 |
| E15 cortex | AGTCCTAGCT ATGTTTGTGC (2) GAGGGATGTT GCCTCTGCAT (2)
| 59.3 | 0.0593 |
| P1 cortex | ATGTTTGTGC (2) GCCTCTGCAT (2)
| 22.7 | 0.0227 |
| Hypothalamus | ATGTTTGTGC (2) GCCTCTGCAT (2) TAGTTTGTAA TGGACCTGAC (2)
| 21.7 | 0.0217 |
| E12.5 retina | GAGGGATGTT GCCTCTGCAT (2) TAGTTTGTAA
| 22.6 | 0.0226 |
| E14.5 retina | ATGTTTGTGC (2) GAGGGATGTT GCCTCTGCAT (2) TAGTTTGTAA
| 87.5 | 0.0875 |
| E16.5 retina | ATGTTTGTGC (2) GAGGGATGTT GCCTCTGCAT (2) TAGTTTGTAA
| 30.7 | 0.0307 |
| E18.5 retina | GAGGGATGTT GCCTCTGCAT (2) TAGTTTGTAA
| 40 | 0.04 |
| P0.5 retina | ATGTTTGTGC (2) GAGGGATGTT GCCTCTGCAT (2) TAGTTTGTAA
| 31.5 | 0.0315 |
| P2.5 retina | ATGTTTGTGC (2) GAGGGATGTT GCCTCTGCAT (2) TAGTTTGTAA
| 49.3 | 0.0493 |
| P4.5 retina | GAGGGATGTT GCCTCTGCAT (2) TAGTTTGTAA
| 47.5 | 0.0475 |
| P6.5 retina | ATGTTTGTGC (2) GAGGGATGTT GCCTCTGCAT (2) TAGTTTGTAA TGGACCTGAC (2)
| 33.3 | 0.0333 |
| P10.5 crx- retina | AGTCCTAGCT ATGTTTGTGC (2) GAGGGATGTT GCCTCTGCAT (2)
| 33.6 | 0.0336 |
| P10.5 crx+ retina | ATGTTTGTGC (2) GAGGGATGTT GCCTCTGCAT (2) TAGTTTGTAA TGGACCTGAC (2)
| 48 | 0.048 |
| Adult retinal | ATGTTTGTGC (2) GAGGGATGTT GCCTCTGCAT (2) TAGTTTGTAA
| 46.4 | 0.0464 |
| ONL | ATGTTTGTGC (2) GAGGGATGTT GCCTCTGCAT (2) TAGTTTGTAA
| 36.3 | 0.0363 |