| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AAAATGTGGA (2) CTTGGGAACT (2) GAGAAAGTCC (2) GAGAAAGTCT (2) GCACTTCTTC (4) GGTTCAAGCC
| 68.4 | 0.0684 |
| Cb medulloblastoma | GAATGGTTTT (2) GCACAGGAAG (2)
| 9.2 | 0.0092 |
| P8 GC+1d culture | AAAATGTGGA (2) CATATCACCT (2) CTTGGGAACT (2) GAGAAAGTCC (2) GAGAAAGTCT (2) GAGAAAGTTT (2) GCACTTCTTC (4)
| 124.3 | 0.1243 |
| P8 GC+SHH+1d culture | AGTGTTTTCT (2) CATATCACCT (2) CTTGGGAACT (2) GAGAAAGTCT (2) GCACAGGAAG (2) GGGAAGGGAA (4) GGTTCAAGCC
| 103.1 | 0.1031 |
| 3T3 fibroblasts | CTTGGGAACT (2) GAGAAAGTCT (2)
| 10.5 | 0.0105 |
| E15 cortex | CTTGGGAACT (2) GAGAAAGTCT (2) GAGAAAGTTT (2)
| 94 | 0.094 |
| P1 cortex | CTTGGGAACT (2) GAGAAAGTCT (2)
| 18.1 | 0.0181 |
| Hypothalamus | CTTGGGAACT (2) GAATGGTTTT (2) GAGAAAGTCT (2) GAGACAGTCT GGAGCAGGGT
| 18.1 | 0.0181 |
| E12.5 retina | AGTGTTTTCT (2) CTTGGGAACT (2) GAGAAAGTCT (2) GGAGCAGGGT GGGAAGGGAA (4)
| 77 | 0.077 |
| E14.5 retina | AGTGTTTTCT (2) CTTGGGAACT (2) GAGAAAGTCT (2) GCACAGGAAG (2) GCACTTCTTC (4) GCCCAGGAAG (2)
| 58.3 | 0.0583 |
| E16.5 retina | AGTGTTTTCT (2) CTTGGGAACT (2) GAGAAAGTCT (2) GCACTTCTTC (4) GCCCAGGAAG (2)
| 90.5 | 0.0905 |
| E18.5 retina | AGTGTTTTCT (2) CTTGGGAACT (2) GAGAAAGTCT (2) GAGACAGTCT GCACTTCTTC (4)
| 78.2 | 0.0782 |
| P0.5 retina | AGTGTTTTCT (2) CTTGGGAACT (2) GAGAAAGTCT (2) GAGAAAGTTT (2)
| 62.9 | 0.0629 |
| P2.5 retina | AAAATGTGGA (2) AGTGTTTTCT (2) CTTGGGAACT (2) GAGAAAGTCT (2) GAGAAAGTTT (2) GGAGCAGGGT GGGAAGGGAA (4)
| 77.6 | 0.0776 |
| P4.5 retina | AGTGTTTTCT (2) CTTGGGAACT (2) GAGAAAGTCT (2)
| 59.5 | 0.0595 |
| P6.5 retina | CTTGGGAACT (2) GAGAAAGTCT (2) GAGAAAGTTT (2) GGGAAGGGAA (4)
| 35 | 0.035 |
| P10.5 crx- retina | CTTGGGAACT (2) GAGAAAGTCT (2)
| 11.2 | 0.0112 |
| P10.5 crx+ retina | GAGAAAGTCT (2) GCACAGGAAG (2)
| 13.4 | 0.0134 |
| ONL | CTTGGGAACT (2) GAGAAAGTCT (2) GGGAAGGGAA (4) GGTTCAAGCC
| 11.4 | 0.0114 |