| Library | Tag (Other Genes) | Normalized Count | % in library |
| Cb medulloblastoma | TTTAACTGAA TTTTAAACTG (6)
| 4.6 | 0.0046 |
| P8 GC+1d culture | CTATGGCATT (2) TTTAACTGAA TTTTAAACTG (6)
| 11.4 | 0.0114 |
| P8 GC+SHH+1d culture | ATCAAAAAGC TTTAACTGAA TTTTAAACTG (6)
| 9.4 | 0.0094 |
| E15 cortex | TTTAACTGAA
| 4.9 | 0.0049 |
| P1 cortex | ATCAAAAAGC
| 4.5 | 0.0045 |
| Hypothalamus | CTATGGCATT (2) CTTATAATGG TAATATGTTA TTTAACTGAA TTTTAAACTG (6)
| 25.3 | 0.0253 |
| E12.5 retina | TTTAACTGAA
| 3.8 | 0.0038 |
| E14.5 retina | TTTAACTGAA
| 3.6 | 0.0036 |
| E16.5 retina | CTTATAATGG TAATATGTTA TATGTTGTGA TTTAACTGAA TTTTAAACTG (6)
| 12.6 | 0.0126 |
| E18.5 retina | CTTATAATGG TTTAACTGAA
| 3.6 | 0.0036 |
| P0.5 retina | CTATGGCATT (2) CTTATAATGG
| 4 | 0.004 |
| P2.5 retina | ATCAAAAAGC CTTATAATGG
| 3.6 | 0.0036 |
| P4.5 retina | CTTATAATGG TTTAACTGAA
| 7.9 | 0.0079 |
| P6.5 retina | ATCAAAAAGC CTTATAATGG TATGTTGTGA TTTAACTGAA TTTTAAACTG (6)
| 10.1 | 0.0101 |
| P10.5 crx- retina | ATCAAAAAGC CTTATAATGG TATGTTGTGA
| 9.4 | 0.0094 |
| P10.5 crx+ retina | CTTATAATGG TTTAACTGAA TTTTAAACTG (6)
| 7.6 | 0.0076 |
| ONL | ATCAAAAAGC TTTAACTGAA TTTTAAACTG (6)
| 13.3 | 0.0133 |